BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035194
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_002523058.1| pentatricopeptide repeat-containing protein,...   119   3e-25
ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containi...   114   6e-24
ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]   114   1e-23

>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/81 (67%), Positives = 73/81 (90%)
 Frame = -2

Query: 251 MGYKTLIKWSNKITPSQVQQLIRAEKNIEKAKTIFDSATAEYANGFKHDHNTFGLMISRL 72
           MG KTL+KWS +ITPS+V+QL+RAE+++ KAK IFDSA+AEY+NGF+HDH TFG+MIS+L
Sbjct: 1   MGMKTLLKWSKQITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKL 60

Query: 71  ASANQFKAAEELVDRMKNEKC 9
            SAN+F+ AEE+++RMK EKC
Sbjct: 61  VSANEFRPAEEMLNRMKEEKC 81


>ref|XP_002523058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537620|gb|EEF39243.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 286

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/82 (67%), Positives = 70/82 (85%)
 Frame = -2

Query: 251 MGYKTLIKWSNKITPSQVQQLIRAEKNIEKAKTIFDSATAEYANGFKHDHNTFGLMISRL 72
           M  KTL KWS KITPSQV+Q+IRAEK+IEKAK +FDSATAEY++GFKHD++TF  +IS+L
Sbjct: 1   MATKTLFKWSKKITPSQVEQVIRAEKDIEKAKLVFDSATAEYSHGFKHDNSTFSAIISKL 60

Query: 71  ASANQFKAAEELVDRMKNEKCS 6
            SANQF   E++++RMK EKC+
Sbjct: 61  LSANQFTLVEDMLNRMKQEKCN 82


>ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
           gi|449484609|ref|XP_004156929.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/80 (68%), Positives = 66/80 (82%)
 Frame = -2

Query: 251 MGYKTLIKWSNKITPSQVQQLIRAEKNIEKAKTIFDSATAEYANGFKHDHNTFGLMISRL 72
           MG K + KW+  +TP+ VQQLI+AE++I+KA  IFDSATAEYANGFKHD NTF LMIS+L
Sbjct: 30  MGSKAMFKWAKTVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKL 89

Query: 71  ASANQFKAAEELVDRMKNEK 12
            SANQF+ AE L+DRMK EK
Sbjct: 90  ISANQFRLAETLLDRMKEEK 109


>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/82 (67%), Positives = 66/82 (80%)
 Frame = -2

Query: 251 MGYKTLIKWSNKITPSQVQQLIRAEKNIEKAKTIFDSATAEYANGFKHDHNTFGLMISRL 72
           MG KT+IKWS +I  +QV QLI+AE++I+KA  IFDSATAEY NGF+H H TF LMISRL
Sbjct: 1   MGSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRL 60

Query: 71  ASANQFKAAEELVDRMKNEKCS 6
            SAN F+ AEEL+ RMK EKC+
Sbjct: 61  VSANHFRLAEELLCRMKEEKCN 82


>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/82 (67%), Positives = 66/82 (80%)
 Frame = -2

Query: 251 MGYKTLIKWSNKITPSQVQQLIRAEKNIEKAKTIFDSATAEYANGFKHDHNTFGLMISRL 72
           MG KT+IKWS +I  +QV QLI+AE++I+KA  IFDSATAEY NGF+H H TF LMISRL
Sbjct: 1   MGSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRL 60

Query: 71  ASANQFKAAEELVDRMKNEKCS 6
            SAN F+ AEEL+ RMK EKC+
Sbjct: 61  VSANHFRLAEELLCRMKEEKCN 82