BLASTX nr result

ID: Coptis21_contig00035134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035134
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...   137   1e-30
emb|CAN71164.1| hypothetical protein VITISV_031057 [Vitis vinifera]   134   8e-30
emb|CAN67970.1| hypothetical protein VITISV_025093 [Vitis vinifera]   134   8e-30
gb|ABI34329.1| Integrase core domain containing protein [Solanum...   134   8e-30
gb|ABI34342.1| Polyprotein, putative [Solanum demissum]               133   2e-29

>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score =  137 bits (344), Expect = 1e-30
 Identities = 62/123 (50%), Positives = 83/123 (67%)
 Frame = -3

Query: 370 CVVCELSKHTRVSYISHMHRSACLFDLIRTDVWGPSPVTSFDGYRYYIAFIDDHSRFTWL 191
           C  C+L KH R S+   + R    F  I +D+WGPS VTSF G+RY++ FID+ SR TW+
Sbjct: 616 CESCQLGKHVRSSFPQTVQRCDSAFSTIHSDIWGPSRVTSF-GFRYFVTFIDEFSRCTWV 674

Query: 190 YLLKSRTEVLPTFLNFMQMIQTQFGVTVRFVRSDNAKEYISDDFKQHLLKKGVIQQLTCP 11
           YL+K R+E+LP F++F   I+ QFG T++  RSDNAKEY S D    L  KG+I Q TCP
Sbjct: 675 YLMKDRSELLPIFVSFYNEIENQFGKTIKIFRSDNAKEYFSHDLSSFLSSKGIIHQSTCP 734

Query: 10  YSP 2
           ++P
Sbjct: 735 HTP 737


>emb|CAN71164.1| hypothetical protein VITISV_031057 [Vitis vinifera]
          Length = 1303

 Score =  134 bits (337), Expect = 8e-30
 Identities = 56/128 (43%), Positives = 87/128 (67%)
 Frame = -3

Query: 385  SNKFQCVVCELSKHTRVSYISHMHRSACLFDLIRTDVWGPSPVTSFDGYRYYIAFIDDHS 206
            S   +C  C+L K   + +  H  R++  FDLI +DVWGPSPV+S + ++YY+ FIDDHS
Sbjct: 643  SLSLECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHS 702

Query: 205  RFTWLYLLKSRTEVLPTFLNFMQMIQTQFGVTVRFVRSDNAKEYISDDFKQHLLKKGVIQ 26
            RFTW+Y L+S++EV  TF  F+  +  QF  +++ +R+D+  EY+S +F+  L  KG+I 
Sbjct: 703  RFTWVYFLRSKSEVFRTFTEFLAYVDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIH 762

Query: 25   QLTCPYSP 2
            Q +CP++P
Sbjct: 763  QRSCPFTP 770


>emb|CAN67970.1| hypothetical protein VITISV_025093 [Vitis vinifera]
          Length = 1023

 Score =  134 bits (337), Expect = 8e-30
 Identities = 55/128 (42%), Positives = 88/128 (68%)
 Frame = -3

Query: 385 SNKFQCVVCELSKHTRVSYISHMHRSACLFDLIRTDVWGPSPVTSFDGYRYYIAFIDDHS 206
           S   +C  C+L K   + +  H  R++  FDLI +DVWGPSP++S + ++YY+ FIDDHS
Sbjct: 419 SLSLECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGPSPISSHEKFKYYVTFIDDHS 478

Query: 205 RFTWLYLLKSRTEVLPTFLNFMQMIQTQFGVTVRFVRSDNAKEYISDDFKQHLLKKGVIQ 26
           RFTW+Y L+S++EV  TF+ F+  +  QF ++++ +R+D+  EY+S +F+  L  KG+I 
Sbjct: 479 RFTWVYFLRSKSEVFRTFIEFLAYVDNQFSISIKTLRTDSGGEYLSTEFQAFLASKGIIH 538

Query: 25  QLTCPYSP 2
           Q +CP +P
Sbjct: 539 QRSCPSTP 546


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score =  134 bits (337), Expect = 8e-30
 Identities = 59/124 (47%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
 Frame = -3

Query: 370 CVVCELSKHTRVSYI-SHMHRSACLFDLIRTDVWGPSPVTSFDGYRYYIAFIDDHSRFTW 194
           C  C+L KHTR ++  S   RS  +F L+ +D+WGPS V+S  G+RY+++FIDD+S+ TW
Sbjct: 515 CESCQLGKHTRATFSRSTEGRSESIFSLVHSDIWGPSRVSSTLGFRYFVSFIDDYSKCTW 574

Query: 193 LYLLKSRTEVLPTFLNFMQMIQTQFGVTVRFVRSDNAKEYISDDFKQHLLKKGVIQQLTC 14
           ++L+K R+E+   F +F   IQ QFGV++R  RSDNA EY+S  F++ +  +G+I Q TC
Sbjct: 575 VFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQFREFMTHQGIIHQTTC 634

Query: 13  PYSP 2
           PY+P
Sbjct: 635 PYTP 638


>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/124 (47%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
 Frame = -3

Query: 370 CVVCELSKHTRVSYI-SHMHRSACLFDLIRTDVWGPSPVTSFDGYRYYIAFIDDHSRFTW 194
           C  C+L KHTR ++  S   RS  +F L+ +D+WGPS V+S  G+RY+++FIDD+SR TW
Sbjct: 276 CESCQLGKHTRATFSRSTEGRSESIFSLVHSDIWGPSRVSSTLGFRYFVSFIDDYSRCTW 335

Query: 193 LYLLKSRTEVLPTFLNFMQMIQTQFGVTVRFVRSDNAKEYISDDFKQHLLKKGVIQQLTC 14
           ++L+K R+E+   F +F   IQ QFGV++R  RSDNA EY+S  F++ +  +G+I Q +C
Sbjct: 336 VFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQFQEFMSHQGIIHQTSC 395

Query: 13  PYSP 2
           PY+P
Sbjct: 396 PYTP 399


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