BLASTX nr result

ID: Coptis21_contig00035090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035090
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Viti...    62   5e-08
ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...    56   3e-06

>ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera]
          Length = 903

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
 Frame = -2

Query: 299 GSSETGWEKSASSRGLNACVISGGSTGLHQE-NRHDASSDLLNEARFVQNRKEIDSQIGA 123
           GSSE+GW  S  SRGLN  ++S G     +  NR   S    +++ F+  RKE D  + +
Sbjct: 3   GSSESGWRNSDISRGLNVSIVSHGRNPRQRHANRIGLSGGASHDSGFISGRKERDHVLSS 62

Query: 122 LGTSWKEV----RIHTDDCLMGK-------SDISLRQWLDTPERVVDHLEC 3
              + K      ++  DD  +          D+SLR WLD PER VD LEC
Sbjct: 63  HTKNHKNQVGISQVCDDDVALDPFVRAIEWGDVSLRHWLDKPERRVDALEC 113


>ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
 Frame = -2

Query: 299 GSSETGWEKSASSRGLNACVISGGSTGLHQENRHDASSDLLNEARFVQNRKEIDSQIGAL 120
           GSS + +  S SSR LN+  +S  +  +H   R+  S +   ++ F   RKE D  + A 
Sbjct: 3   GSSGSAFHNSGSSRALNSSGVSDRNQRVHCPQRNPFSGEASQDSGF---RKERDRVLLAQ 59

Query: 119 GTSWK------------EVRIHTDDCLMGKSDISLRQWLDTPERVVDHLEC 3
           G   K            EV +    C +   DISLRQWLD PER VD  EC
Sbjct: 60  GGQPKNLGGGFSGLCEDEVEVDPFFCAVEWGDISLRQWLDKPERSVDAFEC 110


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