BLASTX nr result
ID: Coptis21_contig00035090
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035090 (399 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Viti... 62 5e-08 ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc... 56 3e-06 >ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera] Length = 903 Score = 62.0 bits (149), Expect = 5e-08 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 12/111 (10%) Frame = -2 Query: 299 GSSETGWEKSASSRGLNACVISGGSTGLHQE-NRHDASSDLLNEARFVQNRKEIDSQIGA 123 GSSE+GW S SRGLN ++S G + NR S +++ F+ RKE D + + Sbjct: 3 GSSESGWRNSDISRGLNVSIVSHGRNPRQRHANRIGLSGGASHDSGFISGRKERDHVLSS 62 Query: 122 LGTSWKEV----RIHTDDCLMGK-------SDISLRQWLDTPERVVDHLEC 3 + K ++ DD + D+SLR WLD PER VD LEC Sbjct: 63 HTKNHKNQVGISQVCDDDVALDPFVRAIEWGDVSLRHWLDKPERRVDALEC 113 >ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] Length = 892 Score = 56.2 bits (134), Expect = 3e-06 Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 12/111 (10%) Frame = -2 Query: 299 GSSETGWEKSASSRGLNACVISGGSTGLHQENRHDASSDLLNEARFVQNRKEIDSQIGAL 120 GSS + + S SSR LN+ +S + +H R+ S + ++ F RKE D + A Sbjct: 3 GSSGSAFHNSGSSRALNSSGVSDRNQRVHCPQRNPFSGEASQDSGF---RKERDRVLLAQ 59 Query: 119 GTSWK------------EVRIHTDDCLMGKSDISLRQWLDTPERVVDHLEC 3 G K EV + C + DISLRQWLD PER VD EC Sbjct: 60 GGQPKNLGGGFSGLCEDEVEVDPFFCAVEWGDISLRQWLDKPERSVDAFEC 110