BLASTX nr result

ID: Coptis21_contig00035011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035011
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515186.1| multidrug resistance protein 1, 2, putative ...    89   7e-26
ref|XP_002515185.1| multidrug resistance protein 1, 2, putative ...    91   2e-25
ref|XP_002273987.1| PREDICTED: ABC transporter B family member 1...    92   3e-25
emb|CBI37062.3| unnamed protein product [Vitis vinifera]               92   3e-25
emb|CAN76787.1| hypothetical protein VITISV_029557 [Vitis vinifera]    92   4e-25

>ref|XP_002515186.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545666|gb|EEF47170.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1292

 Score = 89.4 bits (220), Expect(2) = 7e-26
 Identities = 42/61 (68%), Positives = 48/61 (78%)
 Frame = +1

Query: 1    QLYKRKCEGPRKTGIRQGFVSGIGFGLSICFLFSFYAACFFAGAHLVQDGKTTFPKVFRV 180
            QLY++KCEGP KTGIRQG VSGIGFG+S   LFS YA  F+AGA LV+ GK TF  VF+V
Sbjct: 930  QLYRKKCEGPLKTGIRQGLVSGIGFGVSFFLLFSVYATSFYAGAQLVKHGKATFTDVFQV 989

Query: 181  F 183
            F
Sbjct: 990  F 990



 Score = 52.8 bits (125), Expect(2) = 7e-26
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +3

Query: 186  FSLFVAAIGISESSSYILDSGKAKDSTASIFAILDRKSK 302
            F+L VAA+GIS+SSS+  DS KAK + ASIF+ILDRKSK
Sbjct: 991  FALTVAAMGISQSSSFAPDSSKAKTAVASIFSILDRKSK 1029


>ref|XP_002515185.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545665|gb|EEF47169.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1292

 Score = 90.9 bits (224), Expect(2) = 2e-25
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = +1

Query: 1    QLYKRKCEGPRKTGIRQGFVSGIGFGLSICFLFSFYAACFFAGAHLVQDGKTTFPKVFRV 180
            QLY++KCEGP KTGIRQG +SGIGFG+S   LFS YA  F+AGA LV+ GKTTF  VF+V
Sbjct: 930  QLYRKKCEGPLKTGIRQGLISGIGFGVSFFLLFSVYATSFYAGAQLVKHGKTTFSDVFQV 989

Query: 181  F 183
            F
Sbjct: 990  F 990



 Score = 50.1 bits (118), Expect(2) = 2e-25
 Identities = 24/39 (61%), Positives = 32/39 (82%)
 Frame = +3

Query: 186  FSLFVAAIGISESSSYILDSGKAKDSTASIFAILDRKSK 302
            F+L +A +GIS+SSS+  DS KAK + AS+F+ILDRKSK
Sbjct: 991  FALTMATMGISQSSSFAPDSSKAKSAVASVFSILDRKSK 1029


>ref|XP_002273987.1| PREDICTED: ABC transporter B family member 11 [Vitis vinifera]
          Length = 1297

 Score = 92.4 bits (228), Expect(2) = 3e-25
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = +1

Query: 4    LYKRKCEGPRKTGIRQGFVSGIGFGLSICFLFSFYAACFFAGAHLVQDGKTTFPKVFRVF 183
            LYK+KCEGP +TGIRQG VSGIGFG+S   LF  YA CF+AGA LV+ GKTTF  VFRVF
Sbjct: 937  LYKKKCEGPMRTGIRQGLVSGIGFGVSFFLLFCVYALCFYAGARLVEAGKTTFGDVFRVF 996



 Score = 47.8 bits (112), Expect(2) = 3e-25
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = +3

Query: 186  FSLFVAAIGISESSSYILDSGKAKDSTASIFAILDRKS 299
            F+L +A +GIS+SSS+  DS KAK + ASIF I+DRKS
Sbjct: 997  FALTMATVGISQSSSFSPDSSKAKSAAASIFTIIDRKS 1034


>emb|CBI37062.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score = 92.4 bits (228), Expect(2) = 3e-25
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = +1

Query: 4   LYKRKCEGPRKTGIRQGFVSGIGFGLSICFLFSFYAACFFAGAHLVQDGKTTFPKVFRVF 183
           LYK+KCEGP +TGIRQG VSGIGFG+S   LF  YA CF+AGA LV+ GKTTF  VFRVF
Sbjct: 813 LYKKKCEGPMRTGIRQGLVSGIGFGVSFFLLFCVYALCFYAGARLVEAGKTTFGDVFRVF 872



 Score = 47.8 bits (112), Expect(2) = 3e-25
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = +3

Query: 186 FSLFVAAIGISESSSYILDSGKAKDSTASIFAILDRKS 299
           F+L +A +GIS+SSS+  DS KAK + ASIF I+DRKS
Sbjct: 873 FALTMATVGISQSSSFSPDSSKAKSAAASIFTIIDRKS 910


>emb|CAN76787.1| hypothetical protein VITISV_029557 [Vitis vinifera]
          Length = 1280

 Score = 92.4 bits (228), Expect(2) = 4e-25
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = +1

Query: 4    LYKRKCEGPRKTGIRQGFVSGIGFGLSICFLFSFYAACFFAGAHLVQDGKTTFPKVFRVF 183
            LYK+KCEGP +TGIRQG VSGIGFG+S   LF  YA CF+AGA LV+ GKTTF  VFRVF
Sbjct: 920  LYKKKCEGPMRTGIRQGLVSGIGFGVSFFLLFCVYALCFYAGARLVEAGKTTFGDVFRVF 979



 Score = 47.4 bits (111), Expect(2) = 4e-25
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = +3

Query: 186  FSLFVAAIGISESSSYILDSGKAKDSTASIFAILDRKS 299
            F+L +A +GIS+SSS+  DS KAK + ASIF I+DRKS
Sbjct: 980  FALTMATVGISQSSSFSPDSSKAKSAAASIFTIVDRKS 1017


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