BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034928
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis...    77   1e-12
emb|CBI15085.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002283633.1| PREDICTED: endonuclease III-like [Vitis vini...    70   2e-10
ref|NP_566893.1| HhH-GPD base excision DNA repair protein-relate...    69   4e-10
emb|CAB41866.1| hypothetical protein [Arabidopsis thaliana]            69   4e-10

>ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis]
           gi|223550571|gb|EEF52058.1| Endonuclease III, putative
           [Ricinus communis]
          Length = 291

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/79 (49%), Positives = 47/79 (59%)
 Frame = +2

Query: 56  EPYPNHPRPTPEQCLSVRDDLLSLHGFPEEFAKYRKFRFHSGISSNSFETNHNFKLESLX 235
           EPYP HPRPTPE+CL +RD LL+ HGFP+EFAKYRK R      + S + N +   E   
Sbjct: 28  EPYPTHPRPTPEECLCIRDSLLAFHGFPQEFAKYRKQRLGGDDDNKSSDVNSDTAEE--- 84

Query: 236 XXXXXXXXXXXSVLDGLVK 292
                      +VLDGLVK
Sbjct: 85  -----------TVLDGLVK 92


>emb|CBI15085.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
 Frame = +2

Query: 56  EPYPNHPRPTPEQCLSVRDDLLSLHGFPEEFAKYRKFRF----HSGISSNSFETNHNFKL 223
           +PYP+HPRPTP +C +VRDDLL+LHGFP+ F KYRK R     H+             KL
Sbjct: 31  DPYPSHPRPTPVECRAVRDDLLALHGFPQRFEKYRKLRLPPLPHTSSPGLDGGGGTPVKL 90

Query: 224 ESLXXXXXXXXXXXXSVLDGLV 289
           +              SVLDGLV
Sbjct: 91  DPSDGDDVNGSSQKESVLDGLV 112


>ref|XP_002283633.1| PREDICTED: endonuclease III-like [Vitis vinifera]
          Length = 310

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
 Frame = +2

Query: 56  EPYPNHPRPTPEQCLSVRDDLLSLHGFPEEFAKYRKFRF----HSGISSNSFETNHNFKL 223
           +PYP+HPRPTP +C +VRDDLL+LHGFP+ F KYRK R     H+             KL
Sbjct: 31  DPYPSHPRPTPVECRAVRDDLLALHGFPQRFEKYRKLRLPPLPHTSSPGLDGGGGTPVKL 90

Query: 224 ESLXXXXXXXXXXXXSVLDGLV 289
           +              SVLDGLV
Sbjct: 91  DPSDGDDVNGSSQKESVLDGLV 112


>ref|NP_566893.1| HhH-GPD base excision DNA repair protein-related protein
           [Arabidopsis thaliana] gi|332644814|gb|AEE78335.1|
           HhH-GPD base excision DNA repair protein-related protein
           [Arabidopsis thaliana]
          Length = 293

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/84 (46%), Positives = 47/84 (55%)
 Frame = +2

Query: 41  SIFNNEPYPNHPRPTPEQCLSVRDDLLSLHGFPEEFAKYRKFRFHSGISSNSFETNHNFK 220
           ++    PYP   RPT E+C  VRD LLSLHGFP EFA YR+ R  S  + +  +T  N K
Sbjct: 25  TVDGGNPYPTLLRPTAEECRDVRDALLSLHGFPPEFANYRRQRLRSFSAVDDHDTQCNLK 84

Query: 221 LESLXXXXXXXXXXXXSVLDGLVK 292
            E+L            SVLDGLVK
Sbjct: 85  SETL------NETEEESVLDGLVK 102


>emb|CAB41866.1| hypothetical protein [Arabidopsis thaliana]
          Length = 334

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/84 (46%), Positives = 47/84 (55%)
 Frame = +2

Query: 41  SIFNNEPYPNHPRPTPEQCLSVRDDLLSLHGFPEEFAKYRKFRFHSGISSNSFETNHNFK 220
           ++    PYP   RPT E+C  VRD LLSLHGFP EFA YR+ R  S  + +  +T  N K
Sbjct: 25  TVDGGNPYPTLLRPTAEECRDVRDALLSLHGFPPEFANYRRQRLRSFSAVDDHDTQCNLK 84

Query: 221 LESLXXXXXXXXXXXXSVLDGLVK 292
            E+L            SVLDGLVK
Sbjct: 85  SETL------NETEEESVLDGLVK 102