BLASTX nr result

ID: Coptis21_contig00034880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034880
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX72875.1| MADS-box protein AGL86, partial [Aquilegia coerulea]    86   4e-15
emb|CAN81313.1| hypothetical protein VITISV_016405 [Vitis vinifera]    84   1e-14
dbj|BAG48505.1| type I MADS-box transcription factor [Cryptomeri...    82   4e-14
gb|AFX72873.1| MADS-box protein AGL84 [Aquilegia coerulea]             79   5e-13
ref|XP_002298260.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13

>gb|AFX72875.1| MADS-box protein AGL86, partial [Aquilegia coerulea]
          Length = 319

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 7/118 (5%)
 Frame = -2

Query: 363 MGRGKFPIKLIANEKARKVTFFKRKKGLEKKLAELTTLCGVEACMICVGSDD------GV 202
           MGR K  ++LI+ E AR  TF +RKKGLEKK+ E  TLCGV+ACMI  G ++        
Sbjct: 1   MGRAKLDLRLISKESARNATFVRRKKGLEKKIYEFATLCGVDACMIIYGPNNRNNACMSK 60

Query: 201 VTAWPQDENKVEQVVNRYNKHSNKNKKV-VDDDMLLSKESLIDLANSLDRKLEEVREK 31
              WP++E++V ++++ Y K+  + + + + D   + K+ L D    L +K +E+ ++
Sbjct: 61  PETWPRNEDEVYRIIDNYKKYEKEKRSLGLADSFSVQKKKLGDELAKLRKKNDEISQQ 118


>emb|CAN81313.1| hypothetical protein VITISV_016405 [Vitis vinifera]
          Length = 283

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 40/155 (25%)
 Frame = -2

Query: 363 MGRGKFPIKLIANEKARKVTFFKRKKGLEKKLAELTTLCGVEACMICVG--SDDGVVTA- 193
           MGR + P++LI  EK+RK+TF KR  GL+KK  E++TLCGV+AC+I     SDD  +   
Sbjct: 1   MGRSRLPLELIPKEKSRKITFQKRTMGLKKKTYEISTLCGVDACVIIYSWTSDDRPMEPI 60

Query: 192 -WPQDENKVEQVVNRYNKHSNKNK--KVVD------------------------------ 112
            WP +  KV+ ++NRY +HS + +  K +D                              
Sbjct: 61  FWPSNPEKVKSIINRYKEHSKEERGLKTLDLSGFFEERTKKIQKEISKLGHQGADQTKYP 120

Query: 111 --DDML--LSKESLIDLANSLDRKLEEVREKLNTL 19
             DD L  LS + L +L N+L  KLE ++ ++  L
Sbjct: 121 TWDDQLNDLSVDQLRELVNALGTKLEVIKSRVELL 155


>dbj|BAG48505.1| type I MADS-box transcription factor [Cryptomeria japonica]
          Length = 417

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
 Frame = -2

Query: 363 MGRGKFPIKLIANEKARKVTFFKRKKGLEKKLAELTTLCGVEACMICVG-------SDDG 205
           MGR K PIK I  + +R VTF KRK+GL KK+ EL+ LCGVEACMIC G       S D 
Sbjct: 1   MGRAKIPIKWIPRDTSRNVTFIKRKRGLRKKVEELSILCGVEACMICFGPHTDQQTSQDK 60

Query: 204 VVTAWPQDENKVEQVVNRYNKHS--NKNKKVVDDDMLLSKESLIDLANSLDRKLEEVRE 34
           +   WP + +K  +V+ RY + S   ++KK +D+   L ++ +  L   L+ K +E ++
Sbjct: 61  IPDVWP-NISKALEVIERYRRLSKEEQDKKKLDNSSFL-EQRIRKLRFELNMKRKENKD 117


>gb|AFX72873.1| MADS-box protein AGL84 [Aquilegia coerulea]
          Length = 241

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
 Frame = -2

Query: 363 MGRGKFPIKLIANEKARKVTFFKRKKGLEKKLAELTTLCGVEACMICVGSDDGVVTAWPQ 184
           M R K  +  IAN+ AR+ TF KRKKGL KK++EL+TLCGVEAC I  G +D     WP 
Sbjct: 1   MARKKVKLAWIANDSARRATFKKRKKGLMKKVSELSTLCGVEACAIVYGPEDPQPDVWPS 60

Query: 183 DENKVEQVVNRYNK--HSNKNKKVVDDDMLLSKESLIDLANSLDRKLEEVR 37
             ++  +V+ R+       ++KK+++ + LL ++ +  +   L ++ +E R
Sbjct: 61  SPSEAHRVLTRFKSMPEMEQSKKMMNQEGLL-RQGISKVKEQLKKQQKENR 110


>ref|XP_002298260.1| predicted protein [Populus trichocarpa] gi|222845518|gb|EEE83065.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
 Frame = -2

Query: 363 MGRGKFPIKLIANEKARKVTFFKRKKGLEKKLAELTTLCGVEACMICVG----SDDGVVT 196
           MGRGK  ++LI NE++R +T+ KRKKGL KK  E   LCGV+AC+I +G    +    V 
Sbjct: 1   MGRGKLTMELIRNERSRMITYHKRKKGLTKKAREFQILCGVDACVIILGPKLNNHPVDVE 60

Query: 195 AWPQDENKVEQVVNRYNKHSNKNKKVVD 112
            WP D  +V +++NR+       KK  D
Sbjct: 61  TWPTDRIEVRRIINRFRSEGTDRKKTQD 88


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