BLASTX nr result

ID: Coptis21_contig00034862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034862
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF85695.1| potassium channel [Nicotiana rustica]                  106   2e-21
dbj|BAA84085.1| potassium channel [Nicotiana paniculata]              106   2e-21
dbj|BAD81033.1| potassium channel NKT2 [Nicotiana tabacum]            105   3e-21
gb|AAA96153.1| AKT3 [Arabidopsis thaliana] gi|1172220|gb|AAA9615...   103   1e-20
ref|XP_003532990.1| PREDICTED: potassium channel AKT2/3-like [Gl...   103   1e-20

>gb|ABF85695.1| potassium channel [Nicotiana rustica]
          Length = 826

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/88 (59%), Positives = 60/88 (68%)
 Frame = +3

Query: 6   NHHGYHLNFLTKENENKASLNVRNVSKLILPPLGVTGYTQNQNESRGRTITPLDSGYRCW 185
           N HG   N  T  +E    L+ RN+SKLILPPLG  GY QNQ + +G+ ITP+DS YRCW
Sbjct: 16  NSHGSSNNSGTNSDE----LSFRNLSKLILPPLGSNGYNQNQTQQKGKIITPMDSRYRCW 71

Query: 186 EAFMVFLVAYSAWVYPFEIAFMKSKPTR 269
           E  MV +VAYS WV PFEIAFM S P R
Sbjct: 72  ETLMVVMVAYSVWVCPFEIAFMHSNPNR 99


>dbj|BAA84085.1| potassium channel [Nicotiana paniculata]
          Length = 824

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/88 (59%), Positives = 59/88 (67%)
 Frame = +3

Query: 6   NHHGYHLNFLTKENENKASLNVRNVSKLILPPLGVTGYTQNQNESRGRTITPLDSGYRCW 185
           N HG   N  T   E    L+ RN+SKLILPPLG  GY QNQ + +G+ ITP+DS YRCW
Sbjct: 16  NSHGSSNNSGTNSEE----LSFRNLSKLILPPLGSNGYNQNQTQQKGKIITPMDSRYRCW 71

Query: 186 EAFMVFLVAYSAWVYPFEIAFMKSKPTR 269
           E  MV +VAYS WV PFEIAFM S P R
Sbjct: 72  ETLMVVMVAYSVWVCPFEIAFMHSNPNR 99


>dbj|BAD81033.1| potassium channel NKT2 [Nicotiana tabacum]
          Length = 824

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/88 (57%), Positives = 62/88 (70%)
 Frame = +3

Query: 6   NHHGYHLNFLTKENENKASLNVRNVSKLILPPLGVTGYTQNQNESRGRTITPLDSGYRCW 185
           N+HG + +  T  +E    L  RN+SKLILPPLG   Y QNQ + +G+ ITP+DS YRCW
Sbjct: 16  NNHGSNNSSGTNSDE----LGFRNLSKLILPPLGSNDYNQNQTQQKGKIITPMDSRYRCW 71

Query: 186 EAFMVFLVAYSAWVYPFEIAFMKSKPTR 269
           E  MV +VAYSAWV PFEIAFM+S P R
Sbjct: 72  ETLMVVMVAYSAWVCPFEIAFMRSNPNR 99


>gb|AAA96153.1| AKT3 [Arabidopsis thaliana] gi|1172220|gb|AAA96154.1| AKT3
           [Arabidopsis thaliana] gi|2832670|emb|CAA16770.1|
           potassium channel protein AKT3 [Arabidopsis thaliana]
           gi|7269065|emb|CAB79175.1| potassium channel protein
           AKT3 [Arabidopsis thaliana]
          Length = 787

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/77 (61%), Positives = 58/77 (75%)
 Frame = +3

Query: 39  KENENKASLNVRNVSKLILPPLGVTGYTQNQNESRGRTITPLDSGYRCWEAFMVFLVAYS 218
           +E  + +SL++ N+SKLILPPLGV  Y QN   S G  I+P+DS YRCWE +MV LVAYS
Sbjct: 15  EEEYDASSLSLNNLSKLILPPLGVASYNQNHIRSSGWIISPMDSRYRCWEFYMVLLVAYS 74

Query: 219 AWVYPFEIAFMKSKPTR 269
           AWVYPFE+AF+ S P R
Sbjct: 75  AWVYPFEVAFLNSSPKR 91


>ref|XP_003532990.1| PREDICTED: potassium channel AKT2/3-like [Glycine max]
          Length = 834

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/83 (59%), Positives = 62/83 (74%)
 Frame = +3

Query: 3   KNHHGYHLNFLTKENENKASLNVRNVSKLILPPLGVTGYTQNQNESRGRTITPLDSGYRC 182
           ++ H    N L +E+    S N+RN+SKLILPPLGV+  +QN   S+G  I+P+DS YRC
Sbjct: 25  EHDHSVERNHLNEEDHMSPSFNLRNISKLILPPLGVS--SQNPVNSKGWIISPMDSRYRC 82

Query: 183 WEAFMVFLVAYSAWVYPFEIAFM 251
           WE+FMV LVAYSAWVYPFE+AFM
Sbjct: 83  WESFMVLLVAYSAWVYPFEVAFM 105