BLASTX nr result

ID: Coptis21_contig00034753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034753
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17102.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002527429.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
ref|XP_004160100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    70   1e-10
ref|XP_004145826.1| PREDICTED: uncharacterized protein LOC101215...    70   1e-10
ref|NP_001190369.1| ARM repeat-containing protein-like protein [...    64   1e-08

>emb|CBI17102.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = -2

Query: 441 NLHQYVVVLVGKLDVIEEDLIDHHVEDSNEDHESLNSSLTKATVRPSLSR-ISSILKQWT 265
           +L QYV VLV K D+IE+DL+DH + DSNE++ S  +S  K   R +  R I +IL QWT
Sbjct: 438 SLQQYVSVLVSKSDLIEDDLLDHQLHDSNENNVSSITSAAKQNARTTALRGIFNILNQWT 497

Query: 264 AIRGSTTQKDSVSEDSADDENIDKLLRCCQKY 169
             +    + + +  D  + EN+++LL CC+KY
Sbjct: 498 TSKDCDMKNNLMGADHDNGENVERLLNCCRKY 529


>ref|XP_002527429.1| conserved hypothetical protein [Ricinus communis]
           gi|223533164|gb|EEF34921.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 596

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/93 (39%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
 Frame = -2

Query: 441 NLHQYVVVLVGKLDVIEEDLIDHHVEDSNEDHESLNSSLTKATVR-PSLSRISSILKQWT 265
           +LHQYV+VLV K ++IE++L+D  ++ SNE+  S  SS  K+  R  +L RI  IL QW 
Sbjct: 451 SLHQYVLVLVSKAELIEDNLLDQQLDSSNEESRSSTSSHAKSNARNTALQRIVGILNQWI 510

Query: 264 AIRGSTTQKDSVSEDSADDENIDKLLRCCQKYI 166
           A+R    + D + E +  D ++ +L+  C K+I
Sbjct: 511 ALRDCQEEGDRMDEPNDIDLSVCRLMDSCSKHI 543


>ref|XP_004160100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101215373
           [Cucumis sativus]
          Length = 544

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = -2

Query: 438 LHQYVVVLVGKLDVIEEDLIDHHVEDSNEDHESLNSSLTKATVR-PSLSRISSILKQWTA 262
           L +YV +LV K D+IE+DL+DH + +SN++ + + S+ TK+  R  SL RI SIL  WTA
Sbjct: 444 LFEYVSLLVSKTDLIEDDLLDHCMTESNKEEDGMTSACTKSNSRCISLRRIISILNHWTA 503

Query: 261 IRGSTTQKDSVSEDSADDENIDKLLRCCQKY 169
            +   T  D   E   +D ++++LL CC K+
Sbjct: 504 SKDEGT--DVRDEYCLEDVDVNRLLTCCSKH 532


>ref|XP_004145826.1| PREDICTED: uncharacterized protein LOC101215373 [Cucumis sativus]
          Length = 544

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = -2

Query: 438 LHQYVVVLVGKLDVIEEDLIDHHVEDSNEDHESLNSSLTKATVR-PSLSRISSILKQWTA 262
           L +YV +LV K D+IE+DL+DH + +SN++ + + S+ TK+  R  SL RI SIL  WTA
Sbjct: 444 LFEYVSLLVSKTDLIEDDLLDHCMTESNKEEDGMTSACTKSNSRCISLRRIISILNHWTA 503

Query: 261 IRGSTTQKDSVSEDSADDENIDKLLRCCQKY 169
            +   T  D   E   +D ++++LL CC K+
Sbjct: 504 SKDEGT--DVRDEYCLEDVDVNRLLTCCSKH 532


>ref|NP_001190369.1| ARM repeat-containing protein-like protein [Arabidopsis thaliana]
           gi|227202562|dbj|BAH56754.1| AT5G22820 [Arabidopsis
           thaliana] gi|332005701|gb|AED93084.1| ARM
           repeat-containing protein-like protein [Arabidopsis
           thaliana]
          Length = 534

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = -2

Query: 438 LHQYVVVLVGKLDVIEEDLIDHHVEDSNEDHESLNSSLTKATVRPSLSRISSILKQWTAI 259
           L QY++VL+   D+IE+D +D  +EDSNE   S  S +  +    ++ +I SIL  W A 
Sbjct: 438 LSQYILVLLSNADIIEDDFLDTQLEDSNESRNSFPSQIKSSARTIAIQKIESILNNWNA- 496

Query: 258 RGSTTQKDSVSED-SADDENIDKLLRCCQKYIADTL 154
           R    Q+++V+ + S +  ++ +L  CC +YI + +
Sbjct: 497 RKENLQEETVNGNCSINLADVKRLFDCCHRYIKEAI 532


Top