BLASTX nr result

ID: Coptis21_contig00034688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034688
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably ina...    92   4e-17
emb|CBI29890.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, ...    90   2e-16

>ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|222867933|gb|EEF05064.1|
           predicted protein [Populus trichocarpa]
          Length = 887

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   GPGLPHSCADERS-HPVSIHLNKLIFTLIVVTFAAGIVLVAVGFFIMHRSSSYLKRNFSS 179
           GPGLP+SC D+   H  S  L+ L   LI + F  G++LVA GFF+ HRS+ +       
Sbjct: 516 GPGLPNSCFDDLPRHRNSAGLSSLACALISIAFGLGVLLVAAGFFVFHRSTKWKSE---M 572

Query: 180 GDWNMMLFYPLRITVQELLMGMNEKSAVSDHEGTFGRVHVMKLP 311
           G W+ + FYPLR+T  +L+MGM+EKS+V  + G FGRV+++ LP
Sbjct: 573 GSWHSVFFYPLRVTEHDLVMGMDEKSSVG-NGGAFGRVYIICLP 615


>ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably inactive leucine-rich
           repeat receptor-like protein kinase At5g06940-like
           [Vitis vinifera]
          Length = 887

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/103 (45%), Positives = 67/103 (65%)
 Frame = +3

Query: 3   GPGLPHSCADERSHPVSIHLNKLIFTLIVVTFAAGIVLVAVGFFIMHRSSSYLKRNFSSG 182
           GPGLP+SC D+     +  L KL   LI +   AGI+++A GFF+++R+S   +R    G
Sbjct: 514 GPGLPNSCYDDEPIHKAGGLTKLACALISLALGAGILIIAAGFFVIYRTS---QRKSQMG 570

Query: 183 DWNMMLFYPLRITVQELLMGMNEKSAVSDHEGTFGRVHVMKLP 311
            W  + FYPLR+T  +L+MGM+EKSAV    G FGRV+++ LP
Sbjct: 571 VWRSVFFYPLRVTEHDLIMGMDEKSAVGS-GGAFGRVYIISLP 612


>emb|CBI29890.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/103 (45%), Positives = 67/103 (65%)
 Frame = +3

Query: 3   GPGLPHSCADERSHPVSIHLNKLIFTLIVVTFAAGIVLVAVGFFIMHRSSSYLKRNFSSG 182
           GPGLP+SC D+     +  L KL   LI +   AGI+++A GFF+++R+S   +R    G
Sbjct: 361 GPGLPNSCYDDEPIHKAGGLTKLACALISLALGAGILIIAAGFFVIYRTS---QRKSQMG 417

Query: 183 DWNMMLFYPLRITVQELLMGMNEKSAVSDHEGTFGRVHVMKLP 311
            W  + FYPLR+T  +L+MGM+EKSAV    G FGRV+++ LP
Sbjct: 418 VWRSVFFYPLRVTEHDLIMGMDEKSAVGS-GGAFGRVYIISLP 459


>ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|222872917|gb|EEF10048.1|
           predicted protein [Populus trichocarpa]
          Length = 883

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/104 (45%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   GPGLPHSCA-DERSHPVSIHLNKLIFTLIVVTFAAGIVLVAVGFFIMHRSSSYLKRNFSS 179
           GPGLP+SC+ D   H   + L+ L   L+ + F  GI+LVA GFF+ HRS+ +       
Sbjct: 515 GPGLPNSCSVDLPRHHNPVGLSALACALLSIAFGLGILLVAAGFFVFHRSTKWKSE---M 571

Query: 180 GDWNMMLFYPLRITVQELLMGMNEKSAVSDHEGTFGRVHVMKLP 311
           G W+ + FYPLR+T  +L++GM+EKSAV    G FGRV+++ LP
Sbjct: 572 GGWHSVFFYPLRVTEHDLVVGMDEKSAVGS-GGAFGRVYIISLP 614


>ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223533938|gb|EEF35663.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 891

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   GPGLPHSCADERS-HPVSIHLNKLIFTLIVVTFAAGIVLVAVGFFIMHRSSSYLKRNFSS 179
           GPGLP+SC++E   H  S+ L+     LI + F  GI+LVA  FF+ HRSS +  +    
Sbjct: 519 GPGLPNSCSEELPRHHSSVGLSATACALISIAFGIGILLVAAAFFVFHRSSKWKSQ---M 575

Query: 180 GDWNMMLFYPLRITVQELLMGMNEKSAVSDHEGTFGRVHVMKLP 311
           G W  + FYPLR+T  +L+M M+EK+AV    G FGR++++ LP
Sbjct: 576 GGWRSVFFYPLRVTEHDLVMAMDEKTAVGS-SGAFGRLYIISLP 618


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