BLASTX nr result

ID: Coptis21_contig00034636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034636
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]          193   1e-47
ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis ...   192   3e-47
ref|XP_002311060.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_004173516.1| PREDICTED: probable pectate lyase 12-like, p...   183   1e-44
ref|XP_004142504.1| PREDICTED: probable pectate lyase 13-like [C...   183   1e-44

>gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]
          Length = 496

 Score =  193 bits (490), Expect = 1e-47
 Identities = 85/111 (76%), Positives = 95/111 (85%)
 Frame = +2

Query: 5   DQQPCQTGNPIDDCWRCDPNWQANRQSLADCGIGFGHEALGGKGGEMYVVTDSSDNDPEK 184
           D   C TGNP+DDCWRCDPNWQ NRQ LADCGIGFG +A+GGKGG+ YVVTDSSD DP  
Sbjct: 64  DGSSCLTGNPVDDCWRCDPNWQNNRQRLADCGIGFGQDAMGGKGGQFYVVTDSSDEDPIN 123

Query: 185 PTPGTLRFATVQTQPVWITFSSNMIIKLKQELIITSFKTIDGRGADVHITG 337
           P PGTLR A +QTQP+WITFS+NM+IKLK ELI+ SFKTIDGRGA+VHITG
Sbjct: 124 PAPGTLRHAVIQTQPLWITFSTNMLIKLKYELIVNSFKTIDGRGANVHITG 174


>ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
           gi|296085972|emb|CBI31413.3| unnamed protein product
           [Vitis vinifera]
          Length = 496

 Score =  192 bits (487), Expect = 3e-47
 Identities = 85/111 (76%), Positives = 95/111 (85%)
 Frame = +2

Query: 5   DQQPCQTGNPIDDCWRCDPNWQANRQSLADCGIGFGHEALGGKGGEMYVVTDSSDNDPEK 184
           D   C TGNP+DDCWRCDPNWQ NRQ LADCGIGFG +A+GGKGG+ YVVTDSSD DP  
Sbjct: 64  DGSSCLTGNPVDDCWRCDPNWQNNRQRLADCGIGFGLDAMGGKGGQFYVVTDSSDEDPIN 123

Query: 185 PTPGTLRFATVQTQPVWITFSSNMIIKLKQELIITSFKTIDGRGADVHITG 337
           P PGTLR A +QTQP+WITFS+NM+IKLK ELI+ SFKTIDGRGA+VHITG
Sbjct: 124 PAPGTLRHAVIQTQPLWITFSTNMLIKLKYELIVNSFKTIDGRGANVHITG 174


>ref|XP_002311060.1| predicted protein [Populus trichocarpa] gi|222850880|gb|EEE88427.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  184 bits (466), Expect = 8e-45
 Identities = 80/111 (72%), Positives = 94/111 (84%)
 Frame = +2

Query: 5   DQQPCQTGNPIDDCWRCDPNWQANRQSLADCGIGFGHEALGGKGGEMYVVTDSSDNDPEK 184
           ++  CQTGNPIDDCWRCDPNW  NRQ LADC IGFG   LGG+GG++YVVTDSSD++P  
Sbjct: 69  EKDQCQTGNPIDDCWRCDPNWANNRQRLADCAIGFGQGTLGGRGGQIYVVTDSSDHNPAN 128

Query: 185 PTPGTLRFATVQTQPVWITFSSNMIIKLKQELIITSFKTIDGRGADVHITG 337
           PTPGTLR+A +Q QP+WI FSS+M+IKLK ELI  S+KTIDGRGA+VHITG
Sbjct: 129 PTPGTLRYAVIQDQPLWIIFSSDMVIKLKHELIFNSYKTIDGRGANVHITG 179


>ref|XP_004173516.1| PREDICTED: probable pectate lyase 12-like, partial [Cucumis
           sativus]
          Length = 370

 Score =  183 bits (465), Expect = 1e-44
 Identities = 81/107 (75%), Positives = 93/107 (86%)
 Frame = +2

Query: 17  CQTGNPIDDCWRCDPNWQANRQSLADCGIGFGHEALGGKGGEMYVVTDSSDNDPEKPTPG 196
           C TGNPIDDCWRCDPNW ANRQ LADCGIGFG +A+GGKGG++Y+VTDSSD DP  PTPG
Sbjct: 23  CLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDPTNPTPG 82

Query: 197 TLRFATVQTQPVWITFSSNMIIKLKQELIITSFKTIDGRGADVHITG 337
           TLR A +Q +P+WI FS++M I+LK ELII SFKTIDGRGA+VHITG
Sbjct: 83  TLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITG 129


>ref|XP_004142504.1| PREDICTED: probable pectate lyase 13-like [Cucumis sativus]
          Length = 411

 Score =  183 bits (465), Expect = 1e-44
 Identities = 81/107 (75%), Positives = 93/107 (86%)
 Frame = +2

Query: 17  CQTGNPIDDCWRCDPNWQANRQSLADCGIGFGHEALGGKGGEMYVVTDSSDNDPEKPTPG 196
           C TGNPIDDCWRCDPNW ANRQ LADCGIGFG +A+GGKGG++Y+VTDSSD DP  PTPG
Sbjct: 69  CLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDPTNPTPG 128

Query: 197 TLRFATVQTQPVWITFSSNMIIKLKQELIITSFKTIDGRGADVHITG 337
           TLR A +Q +P+WI FS++M I+LK ELII SFKTIDGRGA+VHITG
Sbjct: 129 TLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITG 175


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