BLASTX nr result
ID: Coptis21_contig00034636
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034636 (338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera] 193 1e-47 ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis ... 192 3e-47 ref|XP_002311060.1| predicted protein [Populus trichocarpa] gi|2... 184 8e-45 ref|XP_004173516.1| PREDICTED: probable pectate lyase 12-like, p... 183 1e-44 ref|XP_004142504.1| PREDICTED: probable pectate lyase 13-like [C... 183 1e-44 >gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera] Length = 496 Score = 193 bits (490), Expect = 1e-47 Identities = 85/111 (76%), Positives = 95/111 (85%) Frame = +2 Query: 5 DQQPCQTGNPIDDCWRCDPNWQANRQSLADCGIGFGHEALGGKGGEMYVVTDSSDNDPEK 184 D C TGNP+DDCWRCDPNWQ NRQ LADCGIGFG +A+GGKGG+ YVVTDSSD DP Sbjct: 64 DGSSCLTGNPVDDCWRCDPNWQNNRQRLADCGIGFGQDAMGGKGGQFYVVTDSSDEDPIN 123 Query: 185 PTPGTLRFATVQTQPVWITFSSNMIIKLKQELIITSFKTIDGRGADVHITG 337 P PGTLR A +QTQP+WITFS+NM+IKLK ELI+ SFKTIDGRGA+VHITG Sbjct: 124 PAPGTLRHAVIQTQPLWITFSTNMLIKLKYELIVNSFKTIDGRGANVHITG 174 >ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera] gi|296085972|emb|CBI31413.3| unnamed protein product [Vitis vinifera] Length = 496 Score = 192 bits (487), Expect = 3e-47 Identities = 85/111 (76%), Positives = 95/111 (85%) Frame = +2 Query: 5 DQQPCQTGNPIDDCWRCDPNWQANRQSLADCGIGFGHEALGGKGGEMYVVTDSSDNDPEK 184 D C TGNP+DDCWRCDPNWQ NRQ LADCGIGFG +A+GGKGG+ YVVTDSSD DP Sbjct: 64 DGSSCLTGNPVDDCWRCDPNWQNNRQRLADCGIGFGLDAMGGKGGQFYVVTDSSDEDPIN 123 Query: 185 PTPGTLRFATVQTQPVWITFSSNMIIKLKQELIITSFKTIDGRGADVHITG 337 P PGTLR A +QTQP+WITFS+NM+IKLK ELI+ SFKTIDGRGA+VHITG Sbjct: 124 PAPGTLRHAVIQTQPLWITFSTNMLIKLKYELIVNSFKTIDGRGANVHITG 174 >ref|XP_002311060.1| predicted protein [Populus trichocarpa] gi|222850880|gb|EEE88427.1| predicted protein [Populus trichocarpa] Length = 356 Score = 184 bits (466), Expect = 8e-45 Identities = 80/111 (72%), Positives = 94/111 (84%) Frame = +2 Query: 5 DQQPCQTGNPIDDCWRCDPNWQANRQSLADCGIGFGHEALGGKGGEMYVVTDSSDNDPEK 184 ++ CQTGNPIDDCWRCDPNW NRQ LADC IGFG LGG+GG++YVVTDSSD++P Sbjct: 69 EKDQCQTGNPIDDCWRCDPNWANNRQRLADCAIGFGQGTLGGRGGQIYVVTDSSDHNPAN 128 Query: 185 PTPGTLRFATVQTQPVWITFSSNMIIKLKQELIITSFKTIDGRGADVHITG 337 PTPGTLR+A +Q QP+WI FSS+M+IKLK ELI S+KTIDGRGA+VHITG Sbjct: 129 PTPGTLRYAVIQDQPLWIIFSSDMVIKLKHELIFNSYKTIDGRGANVHITG 179 >ref|XP_004173516.1| PREDICTED: probable pectate lyase 12-like, partial [Cucumis sativus] Length = 370 Score = 183 bits (465), Expect = 1e-44 Identities = 81/107 (75%), Positives = 93/107 (86%) Frame = +2 Query: 17 CQTGNPIDDCWRCDPNWQANRQSLADCGIGFGHEALGGKGGEMYVVTDSSDNDPEKPTPG 196 C TGNPIDDCWRCDPNW ANRQ LADCGIGFG +A+GGKGG++Y+VTDSSD DP PTPG Sbjct: 23 CLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDPTNPTPG 82 Query: 197 TLRFATVQTQPVWITFSSNMIIKLKQELIITSFKTIDGRGADVHITG 337 TLR A +Q +P+WI FS++M I+LK ELII SFKTIDGRGA+VHITG Sbjct: 83 TLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITG 129 >ref|XP_004142504.1| PREDICTED: probable pectate lyase 13-like [Cucumis sativus] Length = 411 Score = 183 bits (465), Expect = 1e-44 Identities = 81/107 (75%), Positives = 93/107 (86%) Frame = +2 Query: 17 CQTGNPIDDCWRCDPNWQANRQSLADCGIGFGHEALGGKGGEMYVVTDSSDNDPEKPTPG 196 C TGNPIDDCWRCDPNW ANRQ LADCGIGFG +A+GGKGG++Y+VTDSSD DP PTPG Sbjct: 69 CLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDLDPTNPTPG 128 Query: 197 TLRFATVQTQPVWITFSSNMIIKLKQELIITSFKTIDGRGADVHITG 337 TLR A +Q +P+WI FS++M I+LK ELII SFKTIDGRGA+VHITG Sbjct: 129 TLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITG 175