BLASTX nr result

ID: Coptis21_contig00034534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034534
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266...    87   2e-15
ref|XP_002328754.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775...    83   4e-14
ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago ...    81   1e-13
gb|AFK37094.1| unknown [Lotus japonicus]                               80   3e-13

>ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266552 [Vitis vinifera]
           gi|296085473|emb|CBI29205.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 37/75 (49%), Positives = 55/75 (73%)
 Frame = -2

Query: 574 SLMILSWITFGCTIMLLAVATSMNQIQPYGKGWLDGECYVVKDGVYISSAALTLTNLLCI 395
           +L+++SWI+FG  ++L+  ATSMN+ QPY +GWLDG+CY+VKDGVY+ SA L +  +   
Sbjct: 98  TLLVVSWISFGVALILMGTATSMNRRQPYRRGWLDGKCYIVKDGVYVGSAVLVMLTIGST 157

Query: 394 LGSILACKRLIEQEQ 350
           LGS++   R  + EQ
Sbjct: 158 LGSVIMTGRKSQVEQ 172


>ref|XP_002328754.1| predicted protein [Populus trichocarpa] gi|222839052|gb|EEE77403.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/74 (52%), Positives = 50/74 (67%)
 Frame = -2

Query: 571 LMILSWITFGCTIMLLAVATSMNQIQPYGKGWLDGECYVVKDGVYISSAALTLTNLLCIL 392
           L++ SWI+FG  + LL+ ATSM++ Q YGKGWLD ECYVV+DGV+I S  L L     +L
Sbjct: 101 LLVFSWISFGIAVALLSTATSMSRRQAYGKGWLDHECYVVRDGVFIGSGVLILVTTATLL 160

Query: 391 GSILACKRLIEQEQ 350
           GS +   R  E EQ
Sbjct: 161 GSAIFTLRQAEAEQ 174


>ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775915 [Glycine max]
          Length = 191

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 35/76 (46%), Positives = 56/76 (73%)
 Frame = -2

Query: 571 LMILSWITFGCTIMLLAVATSMNQIQPYGKGWLDGECYVVKDGVYISSAALTLTNLLCIL 392
           L+++SW++FG  ++LL VATSM++ Q YG+GWL+GECY+VK G+Y+ SA L L ++  ++
Sbjct: 104 LLLISWLSFGIAVILLIVATSMSRRQAYGEGWLNGECYLVKGGIYVGSAILILVSVESLM 163

Query: 391 GSILACKRLIEQEQKG 344
           GS L   +  E+  +G
Sbjct: 164 GSALLTMKTNEEADQG 179


>ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago truncatula]
           gi|355513829|gb|AES95452.1| hypothetical protein
           MTR_5g025640 [Medicago truncatula]
          Length = 183

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/74 (48%), Positives = 53/74 (71%)
 Frame = -2

Query: 571 LMILSWITFGCTIMLLAVATSMNQIQPYGKGWLDGECYVVKDGVYISSAALTLTNLLCIL 392
           L+++SW++FG T++LL VATSM++ QPYG GWL+GECY+VK G Y  SA L L  +   +
Sbjct: 101 LILISWLSFGVTVILLIVATSMSKRQPYGAGWLNGECYLVKGGTYAGSAILILVTIGSAI 160

Query: 391 GSILACKRLIEQEQ 350
           GS  +  ++ + EQ
Sbjct: 161 GSSFSTIKINQAEQ 174


>gb|AFK37094.1| unknown [Lotus japonicus]
          Length = 182

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 34/74 (45%), Positives = 51/74 (68%)
 Frame = -2

Query: 571 LMILSWITFGCTIMLLAVATSMNQIQPYGKGWLDGECYVVKDGVYISSAALTLTNLLCIL 392
           L+++SW+ FG  ++LL  ATSMN+ QPYG GWL+GECY+V++G Y  SA L L  +  ++
Sbjct: 101 LLLISWVDFGVAVILLITATSMNRRQPYGLGWLNGECYLVEEGTYAGSAILILVTISSVI 160

Query: 391 GSILACKRLIEQEQ 350
           GS L   +  + +Q
Sbjct: 161 GSALLTIKTNQADQ 174


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