BLASTX nr result

ID: Coptis21_contig00034500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034500
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81866.1| unknown [Solanum tuberosum]                            108   6e-22
gb|ADE77710.1| unknown [Picea sitchensis]                             106   2e-21
gb|ADE77681.1| unknown [Picea sitchensis]                             106   2e-21
ref|XP_002329674.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_001781469.1| predicted protein [Physcomitrella patens sub...   105   3e-21

>gb|ABA81866.1| unknown [Solanum tuberosum]
          Length = 236

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/102 (50%), Positives = 66/102 (64%)
 Frame = +2

Query: 8   GVFCGTTYHFTKGIKNSPKGNRLIGALHAVRLNSPRVAGAFAAWSGLTAGFTYGLNRLRQ 187
           G   G+ +HF KGI NSPKG RLIG   AVR+N+PR+ G+FA W GL + F   +  LRQ
Sbjct: 26  GAVGGSAFHFLKGIYNSPKGERLIGGTQAVRMNAPRIGGSFAVWGGLFSTFDCTMVYLRQ 85

Query: 188 KNDPWNATVAGLPAGALLGMRHGVRAASRAAILSTGLCAFLE 313
           K DPWN+ +AG   G  L MR G+ AASR+A+    L A +E
Sbjct: 86  KEDPWNSIIAGAATGGFLQMRQGLGAASRSAMFGGVLLALIE 127


>gb|ADE77710.1| unknown [Picea sitchensis]
          Length = 253

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/104 (49%), Positives = 66/104 (63%)
 Frame = +2

Query: 2   AFGVFCGTTYHFTKGIKNSPKGNRLIGALHAVRLNSPRVAGAFAAWSGLTAGFTYGLNRL 181
           + G   G+ YHF  G+KNSP+G RL G + AV LN+PRV G+FA W GL + F  G+  L
Sbjct: 24  SMGAVGGSVYHFIVGLKNSPRGERLHGGIQAVTLNAPRVGGSFAVWGGLFSAFDCGMVYL 83

Query: 182 RQKNDPWNATVAGLPAGALLGMRHGVRAASRAAILSTGLCAFLE 313
           RQK DPWN+  AG   G  L MR G+ +A+R+AI    L A +E
Sbjct: 84  RQKEDPWNSIAAGAATGGFLQMRQGMGSATRSAIFGGILLALIE 127


>gb|ADE77681.1| unknown [Picea sitchensis]
          Length = 253

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/104 (49%), Positives = 66/104 (63%)
 Frame = +2

Query: 2   AFGVFCGTTYHFTKGIKNSPKGNRLIGALHAVRLNSPRVAGAFAAWSGLTAGFTYGLNRL 181
           + G   G+ YHF  G+KNSP+G RL G + AV LN+PRV G+FA W GL + F  G+  L
Sbjct: 24  SMGAVGGSVYHFIVGLKNSPRGERLHGGIQAVTLNAPRVGGSFAVWGGLFSAFDCGMVYL 83

Query: 182 RQKNDPWNATVAGLPAGALLGMRHGVRAASRAAILSTGLCAFLE 313
           RQK DPWN+  AG   G  L MR G+ +A+R+AI    L A +E
Sbjct: 84  RQKEDPWNSIAAGAATGGFLQMRQGMGSATRSAIFGGILLALIE 127


>ref|XP_002329674.1| predicted protein [Populus trichocarpa] gi|222870555|gb|EEF07686.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/102 (48%), Positives = 64/102 (62%)
 Frame = +2

Query: 8   GVFCGTTYHFTKGIKNSPKGNRLIGALHAVRLNSPRVAGAFAAWSGLTAGFTYGLNRLRQ 187
           G   G+ +HF KG+ NSP G RLIG   AVR+N+PRV G+FA W GL + F   +  LRQ
Sbjct: 26  GAVGGSAFHFIKGVYNSPSGTRLIGGTQAVRMNAPRVGGSFAVWGGLFSAFDCSMVYLRQ 85

Query: 188 KNDPWNATVAGLPAGALLGMRHGVRAASRAAILSTGLCAFLE 313
           K DPWN+ +AG   G  L MR G+ A+ R+A+    L A +E
Sbjct: 86  KEDPWNSIIAGAATGGFLSMRQGLGASGRSALFGGVLLALIE 127


>ref|XP_001781469.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162667106|gb|EDQ53744.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 238

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/104 (47%), Positives = 66/104 (63%)
 Frame = +2

Query: 2   AFGVFCGTTYHFTKGIKNSPKGNRLIGALHAVRLNSPRVAGAFAAWSGLTAGFTYGLNRL 181
           + G   G+ +HF KG+KNSPKG R++G   AVRLN+PR+ G+FA W GL + F   +  L
Sbjct: 24  SMGAVGGSAWHFVKGMKNSPKGERVLGGTQAVRLNAPRIGGSFAVWGGLFSTFDCSMVYL 83

Query: 182 RQKNDPWNATVAGLPAGALLGMRHGVRAASRAAILSTGLCAFLE 313
           RQK DPWN+  AG   G  L +R G R+A+R+AI    L   +E
Sbjct: 84  RQKEDPWNSIAAGAATGGFLQLRAGARSATRSAIFGGLLLGLIE 127


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