BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034495
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511532.1| conserved hypothetical protein [Ricinus comm...    65   8e-09
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    62   6e-08
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    56   4e-06
emb|CBI23315.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002511532.1| conserved hypothetical protein [Ricinus communis]
           gi|223550647|gb|EEF52134.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 493

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/96 (33%), Positives = 57/96 (59%)
 Frame = +2

Query: 2   KILGDLCHVQELKIYSAFIQVLSMREVQMLAPWPINATCLALEAKITKWELPGIAYLLKN 181
           ++L    H   L + +  +Q+LS+RE++ L  + IN T L + +   KWELPG  Y+LK+
Sbjct: 304 ELLARFRHTDTLHMCNWCLQLLSLRELRNLRRFAINCTILEISSTFWKWELPGFIYMLKS 363

Query: 182 SSKLETLNIELLPDRKELLVLDDDFKCEYDFDKRDY 289
             +LE L I + P+  ++ +   D+  +YDFD++ +
Sbjct: 364 CHRLEELIIVMAPNNDQIQI-PQDYLFQYDFDEKRF 398


>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
 Frame = +2

Query: 2   KILGDLCHVQELKIYSAFIQVLSMREVQMLAPWPINATCLALEAKITKWELPGIAYLLKN 181
           K+L  + HV+ L + +  IQVLS+ E + L+    N  CL L+  + KW+LPGIA LL++
Sbjct: 351 KLLKSVNHVKALTVGTWCIQVLSIFEGKDLSSLLSNLKCLILDTHLNKWDLPGIANLLQS 410

Query: 182 SSKLETLNIELLPDRKELLVLDDDFKCE--YDFDKRDYW 292
           S+ LET  I ++    + + ++  F     ++FD+  YW
Sbjct: 411 STHLETFVINMISPCSQQISVEVGFSFTDLHNFDEEKYW 449


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/72 (44%), Positives = 45/72 (62%)
 Frame = +2

Query: 5   ILGDLCHVQELKIYSAFIQVLSMREVQMLAPWPINATCLALEAKITKWELPGIAYLLKNS 184
           +L  L HV++L I +  +QVLS+ EV+ L+        L L  KI KW+LPGIA LL++S
Sbjct: 327 LLEKLQHVEKLTIGTWCLQVLSISEVKGLSSPTSACKYLTLNKKINKWDLPGIASLLQSS 386

Query: 185 SKLETLNIELLP 220
             L+ L I L+P
Sbjct: 387 PNLQKLTINLMP 398


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/72 (41%), Positives = 46/72 (63%)
 Frame = +2

Query: 2   KILGDLCHVQELKIYSAFIQVLSMREVQMLAPWPINATCLALEAKITKWELPGIAYLLKN 181
           K+L  + HV+ L + +  IQVLS+ E + L+    N  CL L+  + KW+LPGIA LL++
Sbjct: 259 KLLKSVNHVKALTVGTWCIQVLSIFEGKDLSSLLSNLKCLILDTHLNKWDLPGIANLLQS 318

Query: 182 SSKLETLNIELL 217
           S+ LET  I ++
Sbjct: 319 STHLETFVINMI 330