BLASTX nr result

ID: Coptis21_contig00034476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034476
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002519905.1| Flotillin-1, putative [Ricinus communis] gi|...    69   5e-10
ref|XP_002309650.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|NP_001237748.1| nodulin [Glycine max] gi|3851530|gb|AAC72337...    68   9e-10
gb|ACU22962.1| unknown [Glycine max]                                   66   3e-09

>ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|222866322|gb|EEF03453.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -2

Query: 314 SAMKEIAGVYRMLPPLLKTVQEQTGMAPPAWLATLPDSRSTN 189
           +AMKE+AGVY+MLPPL KTVQ+QTGM PPAW+ TL DS  +N
Sbjct: 440 NAMKEVAGVYKMLPPLFKTVQDQTGMLPPAWMGTLTDSSHSN 481


>ref|XP_002519905.1| Flotillin-1, putative [Ricinus communis]
           gi|223540951|gb|EEF42509.1| Flotillin-1, putative
           [Ricinus communis]
          Length = 481

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = -2

Query: 308 MKEIAGVYRMLPPLLKTVQEQTGMAPPAWLATLPDS 201
           +KE+AGVY+MLPPLLKTVQEQTGM PPAW+ATL DS
Sbjct: 442 LKEVAGVYKMLPPLLKTVQEQTGMLPPAWMATLTDS 477


>ref|XP_002309650.1| predicted protein [Populus trichocarpa] gi|222855626|gb|EEE93173.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/42 (69%), Positives = 37/42 (88%)
 Frame = -2

Query: 314 SAMKEIAGVYRMLPPLLKTVQEQTGMAPPAWLATLPDSRSTN 189
           +AMKE+AGVY+MLPPL +TVQEQTGM PPAW+ +L DS ++N
Sbjct: 441 NAMKEVAGVYKMLPPLFQTVQEQTGMLPPAWMGSLTDSSNSN 482


>ref|NP_001237748.1| nodulin [Glycine max] gi|3851530|gb|AAC72337.1| nodulin [Glycine
           max]
          Length = 476

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -2

Query: 311 AMKEIAGVYRMLPPLLKTVQEQTGMAPPAWLATLPDSRS 195
           AMK++AGVY+MLPPL KTV EQTGM PPAW+ TLPD+ S
Sbjct: 438 AMKDVAGVYKMLPPLFKTVHEQTGMLPPAWMGTLPDNGS 476


>gb|ACU22962.1| unknown [Glycine max]
          Length = 476

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = -2

Query: 311 AMKEIAGVYRMLPPLLKTVQEQTGMAPPAWLATLPDSRS 195
           AMK++AGVY+MLPPL KTV EQTG+ PPAW+ TLPD+ S
Sbjct: 438 AMKDVAGVYKMLPPLFKTVHEQTGVLPPAWMGTLPDNGS 476


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