BLASTX nr result

ID: Coptis21_contig00034472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034472
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21098.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4...    77   1e-12
emb|CAN76626.1| hypothetical protein VITISV_003542 [Vitis vinifera]    74   1e-11
ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
gb|JAA73542.1| Hypothetical protein, partial [Ixodes ricinus]          72   6e-11

>emb|CBI21098.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/81 (58%), Positives = 59/81 (72%)
 Frame = +2

Query: 5   GMCKEPASFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQDL 184
           GM K P  + P  + LSKV +S+ RRHFE +KEA+P +L VL+A++SELDDE  +S +DL
Sbjct: 145 GMSKAPNYYAPFLSGLSKVFLSIPRRHFEQVKEAVPVILSVLKAMTSELDDEDTNS-EDL 203

Query: 185 IDRAIGIANSIQEVCQKLEGR 247
             RAI IANSIQ VC KL GR
Sbjct: 204 FARAISIANSIQTVCGKLAGR 224


>ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4-like [Vitis vinifera]
          Length = 668

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/66 (59%), Positives = 50/66 (75%)
 Frame = +2

Query: 50  LSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQDLIDRAIGIANSIQEVC 229
           +  V +S+ RRHFE +KEA+P +L VL+A++SELDDE  +S +DL  RAI IANSIQ VC
Sbjct: 219 VGNVFLSIPRRHFEQVKEAVPVILSVLKAMTSELDDEDTNS-EDLFARAISIANSIQTVC 277

Query: 230 QKLEGR 247
            KL GR
Sbjct: 278 GKLAGR 283


>emb|CAN76626.1| hypothetical protein VITISV_003542 [Vitis vinifera]
          Length = 395

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/63 (60%), Positives = 48/63 (76%)
 Frame = +2

Query: 59  VLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQDLIDRAIGIANSIQEVCQKL 238
           V +S+ R HFE +KEA+P +L VL+A++SELDDE  +S +DL  RAI IANSIQ VC KL
Sbjct: 30  VFLSIPRXHFEQVKEAVPVILSVLKAMTSELDDEDTNS-EDLFARAISIANSIQTVCGKL 88

Query: 239 EGR 247
            GR
Sbjct: 89  AGR 91


>ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|222854664|gb|EEE92211.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/71 (50%), Positives = 51/71 (71%)
 Frame = +2

Query: 35  PLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQDLIDRAIGIANS 214
           PL + +SKVL+++QRRHFE +K A+P +L VL+AV SE      +   +L  RA+GIA+S
Sbjct: 116 PLLSGISKVLLAIQRRHFEQVKVAVPVILNVLKAVCSEFSARDTEC-MNLFIRALGIADS 174

Query: 215 IQEVCQKLEGR 247
           I+ +C KLEGR
Sbjct: 175 IRAICAKLEGR 185


>gb|JAA73542.1| Hypothetical protein, partial [Ixodes ricinus]
          Length = 215

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/76 (48%), Positives = 48/76 (63%)
 Frame = +2

Query: 20  PASFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQDLIDRAI 199
           P  F PL   L KVL  +QRRH+EH+K  +P VL VL+ + SE D E  D Y+ L  +A 
Sbjct: 70  PGYFVPLLNGLMKVLALIQRRHYEHVKTTVPVVLNVLRIICSEPDYEDTD-YEKLFHKAA 128

Query: 200 GIANSIQEVCQKLEGR 247
           GIA SI+ +C KLE +
Sbjct: 129 GIACSIRAICAKLEDK 144


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