BLASTX nr result

ID: Coptis21_contig00034461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034461
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527806.1| clathrin assembly protein, putative [Ricinus...   121   1e-25
ref|XP_002269299.1| PREDICTED: putative clathrin assembly protei...   115   9e-24
ref|XP_002308116.1| predicted protein [Populus trichocarpa] gi|2...   115   9e-24
ref|XP_002324695.1| predicted protein [Populus trichocarpa] gi|2...   109   4e-22
dbj|BAD46420.1| phosphoprotein-like [Oryza sativa Japonica Group]     104   1e-20

>ref|XP_002527806.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223532802|gb|EEF34578.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 566

 Score =  121 bits (304), Expect = 1e-25
 Identities = 79/159 (49%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
 Frame = -1

Query: 622 NPSGWELALVTHPSSNTTHVTESKLAGGFDRLLLDSLYEDDVSRRQ-QQPNLGYG-VGMS 449
           N  GWELALVT  S+NT+HV +SKLAGGFDRLLLDSLYEDDV+RRQ Q  N GYG  GM 
Sbjct: 425 NAIGWELALVTTSSNNTSHVVDSKLAGGFDRLLLDSLYEDDVARRQIQLQNAGYGHNGMV 484

Query: 448 NQNPFDP-HDPFSMSNNIAPPPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 272
            QNPF+   DPF MSNNIAPPP+V                                    
Sbjct: 485 VQNPFEQLQDPFVMSNNIAPPPSV----------------QMAIMAQQQQQHHQPMMMVP 528

Query: 271 XXXXXXXXXXMGSANPFGDPFSGLTQSSMPQGHGNHNLI 155
                     MGS+NPFGDPFS   Q+S+PQ  GN  L+
Sbjct: 529 YQYQQPQMQQMGSSNPFGDPFSSPPQNSVPQ-QGNQMLL 566


>ref|XP_002269299.1| PREDICTED: putative clathrin assembly protein At5g57200 [Vitis
           vinifera] gi|296090283|emb|CBI40102.3| unnamed protein
           product [Vitis vinifera]
          Length = 591

 Score =  115 bits (287), Expect = 9e-24
 Identities = 59/93 (63%), Positives = 71/93 (76%), Gaps = 4/93 (4%)
 Frame = -1

Query: 646 GLPNFGHTNPSGWELALVTHPSSNTTHVTESKLAGGFDRLLLDSLYEDDVSR-RQQQPNL 470
           GL +FG  N SGWELALVT PS N +  T++KLAGGF++LLLDSLYED+ +R R QQ N 
Sbjct: 414 GLGDFGGLNASGWELALVTTPSPNISQATDNKLAGGFNKLLLDSLYEDEAARMRLQQQNA 473

Query: 469 GYGVGMSNQ---NPFDPHDPFSMSNNIAPPPNV 380
           GYG GM+ Q   NPF+ +DPFSMSN+IAP  NV
Sbjct: 474 GYGFGMTTQNAPNPFEANDPFSMSNSIAPSTNV 506


>ref|XP_002308116.1| predicted protein [Populus trichocarpa] gi|222854092|gb|EEE91639.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  115 bits (287), Expect = 9e-24
 Identities = 72/168 (42%), Positives = 84/168 (50%), Gaps = 5/168 (2%)
 Frame = -1

Query: 643 LPNFGHTNPSGWELALVTHPSSNTTHVTESKLAGGFDRLLLDSLYEDDVSRRQ-QQPNLG 467
           L   G  N +GWELALVT PS+ T+   +SK+ GGFDRLLLDSLYEDD +R+Q Q  N G
Sbjct: 412 LSELGKPNATGWELALVTTPSNPTSQPMQSKMGGGFDRLLLDSLYEDDTARKQIQMQNAG 471

Query: 466 YGVGMSN-QNPFDPHDPFSMSNNIAPPPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 290
           YG G +   NPF+  DPF+ SN+IAPP NV                              
Sbjct: 472 YGYGATAVHNPFEQQDPFATSNSIAPPTNVQMTMMAQQQQQYQQQQMMMQQHQQQNQSMI 531

Query: 289 XXXXXXXXXXXXXXXXMGS---ANPFGDPFSGLTQSSMPQGHGNHNLI 155
                           +G    ANPF DPFS   QSS PQ  GNH LI
Sbjct: 532 GPCQYQPQYPQQQMQQVGQMGPANPFADPFSSFPQSSEPQ-QGNHMLI 578


>ref|XP_002324695.1| predicted protein [Populus trichocarpa] gi|222866129|gb|EEF03260.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  109 bits (273), Expect = 4e-22
 Identities = 71/171 (41%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
 Frame = -1

Query: 649 HGLPNFGHTNPSGWELALVTHPSSNTTHVTESKLAGGFDRLLLDSLYEDDVSRRQ-QQPN 473
           + L   G  N +GWELALVT PS+ T+   ++K+ GGFDRLLLDSLYEDD +RRQ Q  N
Sbjct: 411 NALSELGKPNATGWELALVTTPSNPTSQPAQNKMGGGFDRLLLDSLYEDDAARRQIQLQN 470

Query: 472 LGYGVG-MSNQNPFDPHDPFSMSNNIAPPPNV----XXXXXXXXXXXXXXXXXXXXXXXX 308
            GYG G  +  NPF+  DPF+MSN+IAPP NV                            
Sbjct: 471 AGYGYGATAMNNPFEQPDPFAMSNSIAPPTNVQMEMMAQQQQQYHQQQMMMQQHYQQNQS 530

Query: 307 XXXXXXXXXXXXXXXXXXXXXXMGSANPFGDPFSGLTQSSMPQGHGNHNLI 155
                                 MG ANPF D FS   Q S P   GNH LI
Sbjct: 531 MTMVPYQYQPQYPLQQMPQMGQMGPANPFADEFSSFPQGSAPH-QGNHMLI 580


>dbj|BAD46420.1| phosphoprotein-like [Oryza sativa Japonica Group]
          Length = 577

 Score =  104 bits (260), Expect = 1e-20
 Identities = 64/158 (40%), Positives = 79/158 (50%), Gaps = 4/158 (2%)
 Frame = -1

Query: 616 SGWELALVTHPSSNTTHVTESKLAGGFDRLLLDSLYEDDVSRRQQQPNLGYGVGMSNQNP 437
           SGWELALVT PS++T+   +++LAGGFD+LLLDSLYED+ +RRQQ  +  Y  G    NP
Sbjct: 422 SGWELALVTAPSTHTSRPVDNQLAGGFDKLLLDSLYEDE-ARRQQIASATYN-GSVAGNP 479

Query: 436 FDPHDPFSMSNNIAPPPNV----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 269
           FDP+DPF+MSNN APP NV                                         
Sbjct: 480 FDPNDPFAMSNNFAPPSNVQLAMMQQQHQDYQEQQQQYYQIQQQQQMVTLPPQTYHQQQQ 539

Query: 268 XXXXXXXXXMGSANPFGDPFSGLTQSSMPQGHGNHNLI 155
                     G +NPFGDPF GL   + P    N NL+
Sbjct: 540 TQYSALPSHDGLSNPFGDPFGGLVAMANPPKQNNSNLV 577


Top