BLASTX nr result

ID: Coptis21_contig00034408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034408
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]    83   3e-14
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...    82   4e-14
emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]    82   4e-14
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]    82   4e-14
gb|ABA97272.1| retrotransposon protein, putative, Ty1-copia subc...    81   8e-14

>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 35/52 (67%), Positives = 45/52 (86%)
 Frame = +2

Query: 161 LIRVLRYLKYISDFGVHYGRYPAVLEGYSDANWIADSQESKSTSGYVFTMAG 316
           L+RVLRYL+Y  ++G+HY RYP +LEGYSDANWI D ++SKSTSGY+FT+ G
Sbjct: 758 LVRVLRYLRYTLNYGLHYLRYPTLLEGYSDANWIFDMKDSKSTSGYIFTIGG 809


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 35/52 (67%), Positives = 46/52 (88%)
 Frame = +2

Query: 161  LIRVLRYLKYISDFGVHYGRYPAVLEGYSDANWIADSQESKSTSGYVFTMAG 316
            +IRVL+YL++  D+G+HY RYPAVLEGYSDANWI++ ++SKS SGYVFT+ G
Sbjct: 888  IIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFTLGG 939


>emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]
          Length = 313

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 35/52 (67%), Positives = 46/52 (88%)
 Frame = +2

Query: 161 LIRVLRYLKYISDFGVHYGRYPAVLEGYSDANWIADSQESKSTSGYVFTMAG 316
           +IRVL+YL++  D+G+HY RYPAVLEGYSDANWI++ ++SKS SGYVFT+ G
Sbjct: 131 IIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFTLGG 182


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 35/52 (67%), Positives = 46/52 (88%)
 Frame = +2

Query: 161  LIRVLRYLKYISDFGVHYGRYPAVLEGYSDANWIADSQESKSTSGYVFTMAG 316
            +IRVL+YL++  D+G+HY RYPAVLEGYSDANWI++ ++SKS SGYVFT+ G
Sbjct: 1095 IIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFTLGG 1146


>gb|ABA97272.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 289

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/71 (53%), Positives = 49/71 (69%)
 Frame = +2

Query: 104 DPYFHHYKRNAIHDKQH*ALIRVLRYLKYISDFGVHYGRYPAVLEGYSDANWIADSQESK 283
           DP F  +  N   D  H AL RV+RYLK I  +G+HY  YP VLEGYSD+NW++D+ E K
Sbjct: 90  DPNFSRFVSNPEDDHWH-ALERVMRYLKGIMSYGIHYAGYPKVLEGYSDSNWVSDADEIK 148

Query: 284 STSGYVFTMAG 316
           +TS Y+FT+ G
Sbjct: 149 ATSRYMFTLGG 159


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