BLASTX nr result

ID: Coptis21_contig00034405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034405
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090490.1| NADH dehydrogenase subunit 6 (mitochondrion)...   221   4e-56
ref|YP_005090449.1| NADH dehydrogenase subunit 6 (mitochondrion)...   221   4e-56
emb|CBJ23344.1| NADH dehydrogenase subunit 6 [Beta vulgaris subs...   221   4e-56
ref|YP_003875484.1| NADH dehydrogenase subunit 6 [Silene latifol...   221   4e-56
gb|ADG85346.1| NADH dehydrogenase subunit 6 [Silene vulgaris]         221   4e-56

>ref|YP_005090490.1| NADH dehydrogenase subunit 6 (mitochondrion) [Lotus japonicus]
           gi|357197354|gb|AET62950.1| NADH dehydrogenase subunit 6
           (mitochondrion) [Lotus japonicus]
          Length = 205

 Score =  221 bits (564), Expect = 4e-56
 Identities = 109/111 (98%), Positives = 110/111 (99%)
 Frame = -1

Query: 334 MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFIFDNETI 155
           MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFI DNETI
Sbjct: 51  MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETI 110

Query: 154 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGHLLYTYYFVWFLVSSLILLV 2
           PLLPTQRNTTSLRYTVYAGKVRSWTNLETLG+LLYTYYFVWFLVSSLILLV
Sbjct: 111 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLV 161


>ref|YP_005090449.1| NADH dehydrogenase subunit 6 (mitochondrion) [Millettia pinnata]
           gi|357197312|gb|AET62909.1| NADH dehydrogenase subunit 6
           (mitochondrion) [Millettia pinnata]
          Length = 205

 Score =  221 bits (564), Expect = 4e-56
 Identities = 109/111 (98%), Positives = 110/111 (99%)
 Frame = -1

Query: 334 MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFIFDNETI 155
           MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFI DNETI
Sbjct: 51  MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETI 110

Query: 154 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGHLLYTYYFVWFLVSSLILLV 2
           PLLPTQRNTTSLRYTVYAGKVRSWTNLETLG+LLYTYYFVWFLVSSLILLV
Sbjct: 111 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLV 161


>emb|CBJ23344.1| NADH dehydrogenase subunit 6 [Beta vulgaris subsp. maritima]
          Length = 205

 Score =  221 bits (564), Expect = 4e-56
 Identities = 109/111 (98%), Positives = 110/111 (99%)
 Frame = -1

Query: 334 MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFIFDNETI 155
           MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFI DNETI
Sbjct: 51  MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETI 110

Query: 154 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGHLLYTYYFVWFLVSSLILLV 2
           PLLPTQRNTTSLRYTVYAGKVRSWTNLETLG+LLYTYYFVWFLVSSLILLV
Sbjct: 111 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLV 161


>ref|YP_003875484.1| NADH dehydrogenase subunit 6 [Silene latifolia]
           gi|301338031|gb|ADK73323.1| NADH dehydrogenase subunit 6
           [Silene latifolia]
          Length = 205

 Score =  221 bits (564), Expect = 4e-56
 Identities = 109/111 (98%), Positives = 110/111 (99%)
 Frame = -1

Query: 334 MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFIFDNETI 155
           MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFI DNETI
Sbjct: 51  MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETI 110

Query: 154 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGHLLYTYYFVWFLVSSLILLV 2
           PLLPTQRNTTSLRYTVYAGKVRSWTNLETLG+LLYTYYFVWFLVSSLILLV
Sbjct: 111 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLV 161


>gb|ADG85346.1| NADH dehydrogenase subunit 6 [Silene vulgaris]
          Length = 157

 Score =  221 bits (564), Expect = 4e-56
 Identities = 109/111 (98%), Positives = 110/111 (99%)
 Frame = -1

Query: 334 MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFIFDNETI 155
           MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFI DNETI
Sbjct: 43  MIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETI 102

Query: 154 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGHLLYTYYFVWFLVSSLILLV 2
           PLLPTQRNTTSLRYTVYAGKVRSWTNLETLG+LLYTYYFVWFLVSSLILLV
Sbjct: 103 PLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLV 153


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