BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034386
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    98   8e-19
emb|CBI39304.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncat...    95   7e-18
ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    92   4e-17

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
 Frame = +3

Query: 18  HGFGYDSTVDDYKVVKVAFLHSGFDYEELDDDKNNEILGSIVEVYSLGTNSWHRIENSQY 197
           +GFGYDS  DDYK+V +++            D +N    S V++Y++ T+ W  + +  Y
Sbjct: 143 YGFGYDSATDDYKLVSISYFV----------DLHNRSFDSHVKIYTMRTDVWKTLPSMPY 192

Query: 198 YMCS--NSALCVNQRLNWLATKEALSDVPTLIVSFDFVAEQFREVPHPKCVCSI--MDAR 365
            +C      + V+  L+W+ T++   +   LIV+FD   E FREV  P  V     MD  
Sbjct: 193 ALCCARTMGVFVSGALHWVVTRDLEPESRDLIVAFDLRFEVFREVALPGTVDGKFDMDVA 252

Query: 366 VLGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLFTI 476
           +L G LCI+      G D+WVM++YG  DSW  +FT+
Sbjct: 253 LLRGMLCIIENRGSDGFDVWVMREYGSHDSWCKMFTV 289


>emb|CBI39304.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
 Frame = +3

Query: 12  ITHGFGYDSTVDDYKVVKVAFLHSGFDYEELDDDKNNEILGSIVEVYSLGTNSWHRIENS 191
           +++ FGYDS  DDYKVV++        YE              VEV+SL +N+W +I + 
Sbjct: 31  VSYAFGYDSITDDYKVVRLVCCSINDSYEYH------------VEVFSLRSNAWRKIRSF 78

Query: 192 QYYMCSNSA-LCVNQRLNWLATKEALSDVPTLIVSFDFVAEQFREVPHPKCVCSIMDA-- 362
            Y++ ++ A   VN  +NW  +++  +D    I S D   E +  VP P C    +    
Sbjct: 79  PYFLFTDEAGKHVNGSINWAVSRDKNND-HWFIASLDLATESYEVVPQPDCANETLKPII 137

Query: 363 RVLGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLFTIPLLTE 491
           RVLGGQ CI++       D+WVM++YGV +SW+ L T+P  ++
Sbjct: 138 RVLGGQFCIIFEYDDI-IDVWVMQEYGVKESWSKLVTVPFFSD 179


>ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487491|gb|AES68694.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 392

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 62/172 (36%), Positives = 92/172 (53%), Gaps = 8/172 (4%)
 Frame = +3

Query: 12  ITHGFGYDSTVDDYKVVKV-AFLHSGFDYEELDDDKNNEILGSIVEVYSLGTNSWHRIEN 188
           +T GFGYDS  D+YKVV V A+L    DY   + +K        V+V++LGTN W  I++
Sbjct: 175 MTFGFGYDSLNDNYKVVVVLAYLVLDEDYRFFNKNK--------VKVHTLGTNIWRTIQD 226

Query: 189 SQYYMCSNSAL---CVNQRLNWLATKEALSDVPTLIVSFDFVAEQFREVPHPKC----VC 347
             +       +    V+  +NWL ++E+ S+ P  IVSFD   E ++++  P      VC
Sbjct: 227 YPFGGLPVPVMKGEFVSGTINWLLSEES-SECPRFIVSFDLAKESYQKISPPNLGGVDVC 285

Query: 348 SIMDARVLGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLFTIPLLTEVEQP 503
            +    VL   LC+       G D+WVMK+YG  +SW  LFTIP + +  +P
Sbjct: 286 DMSALSVLRDCLCVT-----SGVDVWVMKEYGNKESWTKLFTIPCMRDPSKP 332


>ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis]
           gi|223543892|gb|EEF45418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 66/168 (39%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
 Frame = +3

Query: 6   SHITHGFGYDSTVDDYKVVKVAFLHS-----GFDYEELDDDKNNEILGSIVEVYSLGTNS 170
           S+   GFGYDS +DDYKVV V    +     GF YE            SIV+V +L TN 
Sbjct: 93  SYSVFGFGYDSEIDDYKVVAVFCFQNKNSSVGFGYE------------SIVKVCTLRTNC 140

Query: 171 WHRIENSQYYMCSN-SALCVNQRLNWLATKEALSDVPTLIVSFDFVAEQFREVPHPKCVC 347
           W R  +  Y +  + S   VN  LNW    E  S +  +IVSFD   E ++EV  P    
Sbjct: 141 WRRTGSFGYGVPYDVSGKYVNCTLNWPVMSEGDSGLMWIIVSFDIKRETYKEVMQPDYGE 200

Query: 348 SIMDAR--VLGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLFTIPLL 485
            + D    VL G LC++       AD WVMK+YGV +SW  L T+P L
Sbjct: 201 LVYDRTLGVLDGCLCVMCNYHAVRADFWVMKEYGVRESWIRLVTVPYL 248


>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
 Frame = +3

Query: 12  ITHGFGYDSTVDDYKVVKVAFLHSGFDYEELDDDKNNEILGSIVEVYSLGTNSWHRIENS 191
           +T GFGYDS+ D+YKVV V       +Y  LD+D ++    + V+V++LGTN W  I++ 
Sbjct: 166 MTFGFGYDSSKDNYKVVVV------LEYLVLDED-DSFFNKTQVKVHTLGTNIWRTIQDY 218

Query: 192 QY--YMCSNSALCVNQRLNWLATKEALSDVPTLIVSFDFVAEQFREVPHPKC----VCSI 353
            +   +       V+  +NWL +KE   + P  IVSFD   E ++++  P      VC +
Sbjct: 219 HFGGLIVPMKGEFVSGTINWLFSKEQFWEYPCFIVSFDLAKESYQKISPPNLGGVDVCDL 278

Query: 354 MDARVLGGQLCILYRPSGGGADMWVMKDYGVIDSWNCLFTI 476
               VL   LC+    +  G D+W+MK+YG  +SW  LFTI
Sbjct: 279 SALGVLRDCLCV----TTSGYDVWLMKEYGNKESWTKLFTI 315