BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034385
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   156   2e-36
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...   156   2e-36
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   156   2e-36
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   152   3e-35
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     151   5e-35

>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/102 (71%), Positives = 88/102 (86%)
 Frame = -3

Query: 308  VRCIYKTKFNPDGAVQKHKVRLMAKGYSQKPGIDFYKTFAQVSRLETIRALIALAAQKKW 129
            V+ +YKTK NPDG+VQK+K RL+AKG+ QKPGID+Y+T+A V+RLETIR +IALAAQK+W
Sbjct: 752  VKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRW 811

Query: 128  SLYQLDVKSAFLNGELKEEIYVEQPQGFVVDGSEEKVHKLKK 3
             +YQLDVKSAFLNG L EEIYVEQP+GF V G E KV +LKK
Sbjct: 812  KIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKK 853


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
            gi|31429795|gb|AAP51797.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1350

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/102 (71%), Positives = 88/102 (86%)
 Frame = -3

Query: 308  VRCIYKTKFNPDGAVQKHKVRLMAKGYSQKPGIDFYKTFAQVSRLETIRALIALAAQKKW 129
            V+ +YKTK NPDG+VQK+K RL+AKG+ QKPGID+Y+T+A V+RLETIR +IALAAQK+W
Sbjct: 812  VKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRW 871

Query: 128  SLYQLDVKSAFLNGELKEEIYVEQPQGFVVDGSEEKVHKLKK 3
             +YQLDVKSAFLNG L EEIYVEQP+GF V G E KV +LKK
Sbjct: 872  KIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKK 913


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/102 (71%), Positives = 88/102 (86%)
 Frame = -3

Query: 308  VRCIYKTKFNPDGAVQKHKVRLMAKGYSQKPGIDFYKTFAQVSRLETIRALIALAAQKKW 129
            V+ +YKTK NPDG+VQK+K RL+AKG+ QKPGID+Y+T+A V+RLETIR +IALAAQK+W
Sbjct: 889  VKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRW 948

Query: 128  SLYQLDVKSAFLNGELKEEIYVEQPQGFVVDGSEEKVHKLKK 3
             +YQLDVKSAFLNG L EEIYVEQP+GF V G E KV +LKK
Sbjct: 949  KIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKK 990


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1142

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/102 (70%), Positives = 87/102 (85%)
 Frame = -3

Query: 308 VRCIYKTKFNPDGAVQKHKVRLMAKGYSQKPGIDFYKTFAQVSRLETIRALIALAAQKKW 129
           V+ +YKTK N DG+VQK+K RL+AKG+ QKPGID+Y+T+A V+RLETIR +IALAAQK+W
Sbjct: 679 VKWVYKTKLNLDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRW 738

Query: 128 SLYQLDVKSAFLNGELKEEIYVEQPQGFVVDGSEEKVHKLKK 3
            +YQLDVKSAFLNG L EEIYVEQP+GF V G E KV +LKK
Sbjct: 739 KIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKK 780


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/102 (69%), Positives = 86/102 (84%)
 Frame = -3

Query: 308 VRCIYKTKFNPDGAVQKHKVRLMAKGYSQKPGIDFYKTFAQVSRLETIRALIALAAQKKW 129
           V+ +YKTK NPDG+VQK+K RL+AKG+ QKPGID+Y+T+A V+RLETI  +IALAAQK+W
Sbjct: 673 VKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAHVARLETIHTIIALAAQKRW 732

Query: 128 SLYQLDVKSAFLNGELKEEIYVEQPQGFVVDGSEEKVHKLKK 3
            +YQLDVKSAFLNG L EEIYVEQP+ F V G E KV +LKK
Sbjct: 733 KIYQLDVKSAFLNGYLDEEIYVEQPERFSVQGGENKVFRLKK 774