BLASTX nr result

ID: Coptis21_contig00034378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034378
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303078.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
emb|CAN82202.1| hypothetical protein VITISV_011129 [Vitis vinifera]   142   2e-32
ref|XP_001762692.1| predicted protein [Physcomitrella patens sub...   135   3e-30
ref|XP_001762689.1| predicted protein [Physcomitrella patens sub...   135   3e-30
ref|XP_004163077.1| PREDICTED: asparagine--tRNA ligase, cytoplas...   133   1e-29

>ref|XP_002303078.1| predicted protein [Populus trichocarpa] gi|222844804|gb|EEE82351.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  143 bits (360), Expect = 2e-32
 Identities = 62/96 (64%), Positives = 77/96 (80%)
 Frame = +3

Query: 6   REWGVVLTDEHESYLAEKIYKSPVILYNPPKEQKPFYARVNDDGKTVATIDVIVPKAGTL 185
           +EWG+ LT EH SYLAE +Y+ PVI+YN PKE KPFY R+NDDGKT A  D++VPKAGT+
Sbjct: 491 QEWGIALTPEHLSYLAEDVYRKPVIIYNYPKELKPFYVRLNDDGKTAAAFDMVVPKAGTI 550

Query: 186 VRGSQKEERFDKLSTRMKEFNLPREQFEWYLDLRRH 293
           + GSQ EER D L+  ++E  LPREQ+EWY+DLRRH
Sbjct: 551 ITGSQSEERIDILNKTIEELRLPREQYEWYMDLRRH 586


>emb|CAN82202.1| hypothetical protein VITISV_011129 [Vitis vinifera]
          Length = 597

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/97 (65%), Positives = 80/97 (82%)
 Frame = +3

Query: 3   KREWGVVLTDEHESYLAEKIYKSPVILYNPPKEQKPFYARVNDDGKTVATIDVIVPKAGT 182
           K EWG+ LT+EHE+YL  +IYK PVI++N PK+ KPFY RVNDDG+TVA  DV+VPKAGT
Sbjct: 461 KVEWGLSLTEEHETYLVGEIYKRPVIIFNYPKKIKPFYMRVNDDGETVAAFDVVVPKAGT 520

Query: 183 LVRGSQKEERFDKLSTRMKEFNLPREQFEWYLDLRRH 293
           L+RGSQ EER + LSTR+KE  +  E++EWY+DLRRH
Sbjct: 521 LIRGSQNEERMNMLSTRIKELGIRSEEYEWYMDLRRH 557


>ref|XP_001762692.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162686100|gb|EDQ72491.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 493

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/97 (64%), Positives = 74/97 (76%)
 Frame = +3

Query: 3   KREWGVVLTDEHESYLAEKIYKSPVILYNPPKEQKPFYARVNDDGKTVATIDVIVPKAGT 182
           K EWG+ L  EHE YL E+IYK PVI+YN PK+ K FY R+NDD KTVA +DV+VPK G 
Sbjct: 357 KVEWGIDLASEHERYLTEEIYKKPVIVYNYPKDIKAFYMRLNDDEKTVAAMDVLVPKVGE 416

Query: 183 LVRGSQKEERFDKLSTRMKEFNLPREQFEWYLDLRRH 293
           LV GSQ+EER D L  R+KE NLP E +EWY+DLRRH
Sbjct: 417 LVGGSQREERQDVLERRLKEMNLPMEPYEWYIDLRRH 453


>ref|XP_001762689.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162686097|gb|EDQ72488.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 554

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/97 (64%), Positives = 74/97 (76%)
 Frame = +3

Query: 3   KREWGVVLTDEHESYLAEKIYKSPVILYNPPKEQKPFYARVNDDGKTVATIDVIVPKAGT 182
           K EWG+ L  EHE YL E+IYK PVI+YN PK+ K FY R+NDD KTVA +DV+VPK G 
Sbjct: 418 KVEWGIDLASEHERYLTEEIYKKPVIVYNYPKDIKAFYMRLNDDEKTVAAMDVLVPKVGE 477

Query: 183 LVRGSQKEERFDKLSTRMKEFNLPREQFEWYLDLRRH 293
           LV GSQ+EER D L  R+KE NLP E +EWY+DLRRH
Sbjct: 478 LVGGSQREERQDVLERRLKEMNLPMEPYEWYIDLRRH 514


>ref|XP_004163077.1| PREDICTED: asparagine--tRNA ligase, cytoplasmic 2-like [Cucumis
           sativus]
          Length = 613

 Score =  133 bits (335), Expect = 1e-29
 Identities = 60/97 (61%), Positives = 76/97 (78%)
 Frame = +3

Query: 3   KREWGVVLTDEHESYLAEKIYKSPVILYNPPKEQKPFYARVNDDGKTVATIDVIVPKAGT 182
           K ++G  LTD+H SYLA+ I+K PVI+ N PKE KPF  R+NDDGKTVA  DV++PK G 
Sbjct: 477 KLKFGAALTDDHLSYLADTIFKKPVIVCNYPKETKPFNVRLNDDGKTVAAFDVVLPKGGV 536

Query: 183 LVRGSQKEERFDKLSTRMKEFNLPREQFEWYLDLRRH 293
           ++ GSQKEER D L TRM+E  LPREQ+EWYL+++RH
Sbjct: 537 VISGSQKEERLDVLMTRMREMGLPREQYEWYLEIQRH 573


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