BLASTX nr result

ID: Coptis21_contig00034362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034362
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514918.1| protein with unknown function [Ricinus commu...    55   5e-06
emb|CBI27652.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_002271582.1| PREDICTED: uncharacterized protein LOC100267...    55   8e-06

>ref|XP_002514918.1| protein with unknown function [Ricinus communis]
           gi|223545969|gb|EEF47472.1| protein with unknown
           function [Ricinus communis]
          Length = 613

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/51 (56%), Positives = 35/51 (68%)
 Frame = -3

Query: 511 NDMFDEYDTQDAEEDTRQLARVTDLITSEHIDAVELTIVLLSFSDISMVKT 359
           N M D+ DT+D EED +QLARV   ITS H+D V L  VL +F DIS+V T
Sbjct: 290 NGMVDQDDTEDPEEDEQQLARVKGWITSHHLDTVGLNDVLSNFPDISVVLT 340


>emb|CBI27652.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/49 (57%), Positives = 36/49 (73%)
 Frame = -3

Query: 505 MFDEYDTQDAEEDTRQLARVTDLITSEHIDAVELTIVLLSFSDISMVKT 359
           M DE DTQD+ ED +QL+RV D I+  H+D +ELT VL +F DIS+V T
Sbjct: 202 MVDEDDTQDSVEDEQQLSRVKDWISCCHLDTIELTDVLSNFPDISVVLT 250


>ref|XP_002271582.1| PREDICTED: uncharacterized protein LOC100267642 [Vitis vinifera]
          Length = 662

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/49 (57%), Positives = 36/49 (73%)
 Frame = -3

Query: 505 MFDEYDTQDAEEDTRQLARVTDLITSEHIDAVELTIVLLSFSDISMVKT 359
           M DE DTQD+ ED +QL+RV D I+  H+D +ELT VL +F DIS+V T
Sbjct: 337 MVDEDDTQDSVEDEQQLSRVKDWISCCHLDTIELTDVLSNFPDISVVLT 385


Top