BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034343
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528030.1| pentatricopeptide repeat-containing protein,...   162   3e-38
emb|CBI31326.3| unnamed protein product [Vitis vinifera]              157   9e-37
ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...   157   9e-37
emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]   157   9e-37
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35

>ref|XP_002528030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532560|gb|EEF34348.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  162 bits (409), Expect = 3e-38
 Identities = 74/106 (69%), Positives = 88/106 (83%)
 Frame = -3

Query: 319 IDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEI 140
           ID+VVWGAMI+GFAHNR  +EAL+YLRWMV EG+ PNSVI+T  LP +GE WA  LG+E+
Sbjct: 285 IDIVVWGAMIAGFAHNRYQREALDYLRWMVSEGLYPNSVIVTTILPVIGEAWARKLGQEV 344

Query: 139 HGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVI 2
           HGYV+KTK Y+NQL IQ+ LIDMYCKCGDMVSGR+VF  S  R+ I
Sbjct: 345 HGYVVKTKRYSNQLTIQTGLIDMYCKCGDMVSGRRVFYGSMERNAI 390


>emb|CBI31326.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  157 bits (397), Expect = 9e-37
 Identities = 72/105 (68%), Positives = 87/105 (82%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           DVVVWGAMI+GF HNRL +EALEYLRWM REG+ PNSVI+T  LP +GE+ A  LG+E+H
Sbjct: 109 DVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVH 168

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVI 2
            YV+KTK+Y+ Q+FIQS+LIDMYCKCGDM SGRQVF  S  R+ +
Sbjct: 169 AYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAV 213



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/105 (36%), Positives = 58/105 (55%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           + V W A++SG+  N    +AL  + WM +EG  P+ V +   LP   EL A   GKEIH
Sbjct: 211 NAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIH 270

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVI 2
            Y +K   +   + I +SL+ MY KCG++    ++F   + R+VI
Sbjct: 271 SYAVK-NGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVI 314


>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  157 bits (397), Expect = 9e-37
 Identities = 72/105 (68%), Positives = 87/105 (82%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           DVVVWGAMI+GF HNRL +EALEYLRWM REG+ PNSVI+T  LP +GE+ A  LG+E+H
Sbjct: 319 DVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVH 378

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVI 2
            YV+KTK+Y+ Q+FIQS+LIDMYCKCGDM SGRQVF  S  R+ +
Sbjct: 379 AYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAV 423



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/105 (36%), Positives = 58/105 (55%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           + V W A++SG+  N    +AL  + WM +EG  P+ V +   LP   EL A   GKEIH
Sbjct: 421 NAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIH 480

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVI 2
            Y +K   +   + I +SL+ MY KCG++    ++F   + R+VI
Sbjct: 481 SYAVK-NGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVI 524



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/97 (34%), Positives = 50/97 (51%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           +V+ W AMI  +  N    EA+   R M      P+SV +   L   GEL    LGKEIH
Sbjct: 522 NVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIH 581

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFR 26
           G ++K K++ +  F+ + +I MY K G +   +  F+
Sbjct: 582 GQILK-KDFESIPFVSAEIIKMYGKFGAISKAKLAFK 617


>emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]
          Length = 664

 Score =  157 bits (397), Expect = 9e-37
 Identities = 72/105 (68%), Positives = 87/105 (82%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           DVVVWGAMI+GF HNRL +EALEYLRWM REG+ PNSVI+T  LP +GE+ A  LG+E+H
Sbjct: 258 DVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVH 317

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVI 2
            YV+KTK+Y+ Q+FIQS+LIDMYCKCGDM SGRQVF  S  R+ +
Sbjct: 318 AYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAV 362



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/105 (36%), Positives = 58/105 (55%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           + V W A++SG+  N    +AL  + WM +EG  P+ V +   LP   EL A   GKEIH
Sbjct: 360 NAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIH 419

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVI 2
            Y +K   +   + I +SL+ MY KCG++    ++F   + R+VI
Sbjct: 420 SYAVK-NGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVI 463



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/97 (34%), Positives = 50/97 (51%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           +V+ W AMI  +  N    EA+   R M      P+SV +   L   GEL    LGKEIH
Sbjct: 461 NVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIH 520

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFR 26
           G ++K K++ +  F+ + +I MY K G +   +  F+
Sbjct: 521 GQILK-KDFESIPFVSAEIIKMYGKFGAISKAKLAFK 556


>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 716

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/105 (65%), Positives = 86/105 (81%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           DVVVWG++I+GFAHNRL +EALEY R M+ +G+ PNSVILT  LP +GE+WA  LG+E+H
Sbjct: 282 DVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVH 341

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVI 2
            YVIKTK+Y+ Q+FIQS+LIDMYCKCGD+ SGR VF  S  R+ I
Sbjct: 342 AYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAI 386



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/105 (38%), Positives = 59/105 (56%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           + + W A++SG+A N   ++A+  + WM +EG  P+ V +   LP   +L A   GKEIH
Sbjct: 384 NAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIH 443

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVI 2
            Y +K     N + I SSL+ MY KCG M    ++F   E R+VI
Sbjct: 444 AYAMKNCFLPN-VSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVI 487



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/102 (31%), Positives = 53/102 (51%)
 Frame = -3

Query: 316 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 137
           +V++W AMI  +  N+   EA++  R M      P++V ++  L    E     +GKEIH
Sbjct: 485 NVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIH 544

Query: 136 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVR 11
           G V+K K +    F+ + L+ +Y KCG +   + VF    V+
Sbjct: 545 GQVLKRK-FEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVK 585