BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034326
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   204   2e-50
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...   197   2e-48
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...   197   2e-48
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   195   1e-47
ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [S...   195   1e-47

>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  204 bits (519), Expect = 2e-50
 Identities = 102/255 (40%), Positives = 155/255 (60%), Gaps = 5/255 (1%)
 Frame = +1

Query: 43   LRQELLAWFIKEEE-----FWKQKSSNSWLRDGGRNTKFFHLSTLYRRRRNTIEKIKNEE 207
            +R+E+L + +++ E     +WKQ++  +WL  G RNT FFH S   RRRRN I K++ E+
Sbjct: 572  VREEVLRYRLEKLEQQVDIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRRED 631

Query: 208  GEWKEGRSEVGSSLNDYFKDIFTSDHPGRNAQIMDLFQPCVTSRENELLNAVPTSEDIWA 387
            G W E   +  + + ++FK +FTS+    + +++D+    V+   NE L A  T E++  
Sbjct: 632  GSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKE 691

Query: 388  VVRKLGSLKAPGPDGFQGIFYQKCWDIIGPTVITFVQDFFTHGFLNPGFNETYIALISKV 567
             +  +G LKAPGPDG    FY+ CWD++G  V   V +    G +  G+N+  I LI KV
Sbjct: 692  ALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKV 751

Query: 568  DNPDHASKFRPISLCNFGYKIISKILANRLKGLINKIISPFQGAFIKGRSIGDNVGLACE 747
              P+     RPISLCN  YK++SK+LANRLK ++  +ISP Q AF+ GR I DN+ +A E
Sbjct: 752  KKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADE 811

Query: 748  VFHNMKNMRTKKEGW 792
            + H M+N R+ + G+
Sbjct: 812  MTHYMRNKRSGQVGY 826


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score =  197 bits (501), Expect = 2e-48
 Identities = 101/253 (39%), Positives = 151/253 (59%), Gaps = 2/253 (0%)
 Frame = +1

Query: 43   LRQELLAWFIKEEEFWKQKSSNSWLRDGGRNTKFFHLSTLYRRRRNTIEKIKNEEGEWKE 222
            +++EL   +  EE +W+QKS N W+++G RNT+FFH  T  R   N +  IK+EEG    
Sbjct: 703  IQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYR 762

Query: 223  GRSEVGSSLNDYFKDIFTSDHPGRNAQIMDL--FQPCVTSRENELLNAVPTSEDIWAVVR 396
            G  E+G    ++F  ++ S+  GR   I+D   F+P VT + N+ L    +  +I+  + 
Sbjct: 763  GDKEIGVHAQEFFTKVYESN--GRPVSIIDFAGFKPIVTEQINDDLTKDLSDLEIYNAIC 820

Query: 397  KLGSLKAPGPDGFQGIFYQKCWDIIGPTVITFVQDFFTHGFLNPGFNETYIALISKVDNP 576
             +G  KAPGPDG    FY+ CW+I+GP VI  V+ FF   ++    N T I +I K+ NP
Sbjct: 821  HIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNP 880

Query: 577  DHASKFRPISLCNFGYKIISKILANRLKGLINKIISPFQGAFIKGRSIGDNVGLACEVFH 756
            +  S +RPI+LCN  YKIISK L  RLKG ++ I+S  Q AFI GR + DNV +A E+ H
Sbjct: 881  ETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMH 940

Query: 757  NMKNMRTKKEGWI 795
            ++K  +   + ++
Sbjct: 941  SLKTRKRVSQSYM 953


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score =  197 bits (501), Expect = 2e-48
 Identities = 101/253 (39%), Positives = 151/253 (59%), Gaps = 2/253 (0%)
 Frame = +1

Query: 43   LRQELLAWFIKEEEFWKQKSSNSWLRDGGRNTKFFHLSTLYRRRRNTIEKIKNEEGEWKE 222
            +++EL   +  EE +W+QKS N W+++G RNT+FFH  T  R   N +  IK+EEG    
Sbjct: 683  IQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYR 742

Query: 223  GRSEVGSSLNDYFKDIFTSDHPGRNAQIMDL--FQPCVTSRENELLNAVPTSEDIWAVVR 396
            G  E+G    ++F  ++ S+  GR   I+D   F+P VT + N+ L    +  +I+  + 
Sbjct: 743  GDKEIGVHAQEFFTKVYESN--GRPVSIIDFAGFKPIVTEQINDDLTKDLSDLEIYNAIC 800

Query: 397  KLGSLKAPGPDGFQGIFYQKCWDIIGPTVITFVQDFFTHGFLNPGFNETYIALISKVDNP 576
             +G  KAPGPDG    FY+ CW+I+GP VI  V+ FF   ++    N T I +I K+ NP
Sbjct: 801  HIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNP 860

Query: 577  DHASKFRPISLCNFGYKIISKILANRLKGLINKIISPFQGAFIKGRSIGDNVGLACEVFH 756
            +  S +RPI+LCN  YKIISK L  RLKG ++ I+S  Q AFI GR + DNV +A E+ H
Sbjct: 861  ETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMH 920

Query: 757  NMKNMRTKKEGWI 795
            ++K  +   + ++
Sbjct: 921  SLKTRKRVSQSYM 933


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  195 bits (495), Expect = 1e-47
 Identities = 100/249 (40%), Positives = 150/249 (60%), Gaps = 1/249 (0%)
 Frame = +1

Query: 40   KLRQELLAWFIKEEEFWKQKSSNSWLRDGGRNTKFFHLSTLYRRRRNTIEKIKNEEGEWK 219
            KLR+E+      EE  W QKS    + DG RNT++FHLST+ RR RN I+ ++N +GEW 
Sbjct: 326  KLRREMDIVLDDEETLWFQKSRMEAICDGDRNTRYFHLSTVIRRSRNRIDMLQNNDGEWI 385

Query: 220  EGRSEVGSSLNDYFKDIFTSDHPGRN-AQIMDLFQPCVTSRENELLNAVPTSEDIWAVVR 396
                EV + +  Y+K +F+ D    N   +   F P +T+ + E +    +  ++   ++
Sbjct: 386  SNPMEVKAMVLGYWKHLFSEDSVQSNFCHLPRDFFPQITADDFEKMMRPLSEVEVTLALK 445

Query: 397  KLGSLKAPGPDGFQGIFYQKCWDIIGPTVITFVQDFFTHGFLNPGFNETYIALISKVDNP 576
             +   KAPGPDGFQ +FYQ+ WD++ P V+  V +  +      GFN+T+I LI K+D P
Sbjct: 446  SMKPFKAPGPDGFQPLFYQRFWDLVKPNVMHLVSEILSGRDFPEGFNDTFIVLIPKMDIP 505

Query: 577  DHASKFRPISLCNFGYKIISKILANRLKGLINKIISPFQGAFIKGRSIGDNVGLACEVFH 756
              A  FRPI LCN  YKI++K++ NRLK ++  +ISP Q +F+  R I DNV +  E+FH
Sbjct: 506  QLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLISPTQCSFVPNRQITDNVIIVQEMFH 565

Query: 757  NMKNMRTKK 783
            +M+N + KK
Sbjct: 566  SMRNKQGKK 574


>ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
            gi|241916792|gb|EER89936.1| hypothetical protein
            SORBIDRAFT_10g022040 [Sorghum bicolor]
          Length = 1088

 Score =  195 bits (495), Expect = 1e-47
 Identities = 105/250 (42%), Positives = 149/250 (59%), Gaps = 4/250 (1%)
 Frame = +1

Query: 43   LRQELLAWFIKEEEFWKQKSSNSWLRDGGRNTKFFHLSTLYRRRRNTIEKIKNEEGEWKE 222
            L +++LA   KEE + +Q+   +W   G RNTKFFH + L R RRNTI      +G +  
Sbjct: 329  LHEDILA---KEEAYHRQRYKKNWAVAGDRNTKFFHQAILKRARRNTISHFIKPDGSYAT 385

Query: 223  GRSEVGSSLNDYFKDIFTSDHPGRNAQIMDLFQPCVTSRE--NELLNAVPTSEDIWAVVR 396
             +S++    N+YFK+IFTSD   R  +     Q   T R   N   ++VP S +I A+++
Sbjct: 386  TQSQLAKVANNYFKEIFTSDRDNRLREHSWAVQDLSTERMEINPFTDSVPDSSEILAIIK 445

Query: 397  KLGSLKAPGPDGFQGIFYQKCWDIIGPTVITFVQDFFTHGFLNPGFNETYIALISKVDNP 576
             + S  APGPDG    FY+  W+  G  V+  V DF+ + +L+P  N+TYIA+I KV+NP
Sbjct: 446  NMRSNAAPGPDGLNAEFYKSSWEWTGKDVVNLVTDFYNNNYLHPDINKTYIAMIPKVNNP 505

Query: 577  DHASKFRPISLCNFGYKIISKILANRLKGLINKIISPFQGAFIKGRSIGDNVGLACEVFH 756
            +    +RPISLCN  YKII+K L +R+K  +  II P Q AFIKGR I  N+ +A E+ H
Sbjct: 506  NTPRDYRPISLCNVVYKIIAKSLVDRIKFHLPHIIHPSQSAFIKGRHIASNIIIAQEIIH 565

Query: 757  --NMKNMRTK 780
              N+KN + K
Sbjct: 566  SFNLKNWKHK 575