BLASTX nr result

ID: Coptis21_contig00034325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034325
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   137   1e-30
ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   131   5e-29
ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putat...   125   5e-27
ref|XP_003542653.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   120   1e-25
ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   118   6e-25

>ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
           vinifera]
          Length = 587

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/108 (60%), Positives = 83/108 (76%), Gaps = 6/108 (5%)
 Frame = +3

Query: 6   PGHDLAVDVDRAELFCCTCKDQIYDKDFDESVVLAQKEASTLGGSVAVAA---ENVRKRR 176
           PGH++AVDVDRAELFCC C+DQ+YD+DFD +VV+AQ  ASTLGG    ++   EN+RKRR
Sbjct: 93  PGHEIAVDVDRAELFCCACRDQVYDRDFDAAVVVAQTTASTLGGGSIRSSPPPENLRKRR 152

Query: 177 RVEYKPWVPDSREHLLMRQGSSAL---DSGEGESSTALPWGLRGLNNL 311
           RV+Y+PW PD RE +LM + SS L   +  +G + + LPWGLRGLNNL
Sbjct: 153 RVDYRPWTPDLRERVLMTRNSSPLQRTEGADGANLSNLPWGLRGLNNL 200


>ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus] gi|449518463|ref|XP_004166261.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 602

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/114 (57%), Positives = 81/114 (71%), Gaps = 13/114 (11%)
 Frame = +3

Query: 9   GHDLAVDVDRAELFCCTCKDQIYDKDFDESVVLAQKEASTLGGSV-----------AVAA 155
           GH++AVDVDRAELFCC C+DQ+YD+DFD +VVLAQ  ASTLGG+            ++  
Sbjct: 105 GHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLAQTTASTLGGNAVSSSGVSPSQPSLPP 164

Query: 156 ENVRKRRRVEYKPWVPDSREHLLMRQGSSALDSGEGE--SSTALPWGLRGLNNL 311
           EN+RKRRRV+Y+PW+PD RE +L+   SS LD       S + LPWGLRGLNNL
Sbjct: 165 ENLRKRRRVDYQPWMPDLRERVLVGANSSPLDCVNSNLGSESELPWGLRGLNNL 218


>ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223529676|gb|EEF31620.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 577

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/105 (57%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
 Frame = +3

Query: 3   SPGHDLAVDVDRAELFCCTCKDQIYDKDFDESVVLAQKEASTLGGSVAVAA--ENVRKRR 176
           SPGH++AVDVDRAELFCC C+DQ+YD+DFD +VVL+Q  +    G+  +++  EN+RKRR
Sbjct: 93  SPGHEIAVDVDRAELFCCACRDQVYDRDFDAAVVLSQTTSFKAAGNAILSSKPENLRKRR 152

Query: 177 RVEYKPWVPDSREHLLMRQGSSALDSGEGESSTALPWGLRGLNNL 311
           RV+Y+PW PD R+ +LM  GSS L     E S+ +P GLRGLNNL
Sbjct: 153 RVDYRPWRPDVRDRMLMESGSSPL-----EYSSEMPRGLRGLNNL 192


>ref|XP_003542653.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 594

 Score =  120 bits (300), Expect = 1e-25
 Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 7/109 (6%)
 Frame = +3

Query: 6   PGHDLAVDVDRAELFCCTCKDQIYDKDFDESVVLAQKEASTLGGS-----VAVAAENVRK 170
           PGH +AVDVDRAELFCC C+DQ+YD+DFD +VV+AQ  ASTLGG       +   EN+RK
Sbjct: 98  PGHQIAVDVDRAELFCCACRDQVYDRDFDAAVVIAQTAASTLGGDPPPPIPSPQPENLRK 157

Query: 171 RRRVEYKPWVPDSREHLLMRQGSSALDSGEG--ESSTALPWGLRGLNNL 311
           +RRV+Y PW PD RE  L+   S  +   E   + S  LP GLRGLNNL
Sbjct: 158 KRRVDYWPWAPDLRERALIGSFSGPIAGAETVVDHSPGLPRGLRGLNNL 206


>ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 592

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/110 (56%), Positives = 76/110 (69%), Gaps = 8/110 (7%)
 Frame = +3

Query: 6   PGHDLAVDVDRAELFCCTCKDQIYDKDFDESVVLAQKEASTLGGS-----VAVAAENVRK 170
           PGH +AVDVDRAELFCC C DQ+YD+DFD +VV+AQ  ASTLGG       +   EN+RK
Sbjct: 98  PGHQIAVDVDRAELFCCACHDQVYDRDFDAAVVIAQTAASTLGGDPPPPIPSPQPENLRK 157

Query: 171 RRRVEYKPWVPDSREHLLMRQGSSALDSGEG---ESSTALPWGLRGLNNL 311
           +RRV+Y+PW PD RE  L+   S  + +G G   + S  LP GLRGLNNL
Sbjct: 158 KRRVDYRPWAPDLRERALIGSCSVPI-AGAGTVADLSPDLPRGLRGLNNL 206


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