BLASTX nr result

ID: Coptis21_contig00034309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034309
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD28258.1|AF128404_1 cellulase homolog [Nicotiana alata]          116   5e-35
ref|XP_004168441.1| PREDICTED: endoglucanase 13-like, partial [C...   110   7e-35
ref|XP_004153697.1| PREDICTED: endoglucanase 12-like [Cucumis sa...   110   7e-35
gb|AAL30454.1|AF362949_1 endo-beta-1,4-glucanase precursor [Nico...   107   5e-31
ref|XP_002299478.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-31

>gb|AAD28258.1|AF128404_1 cellulase homolog [Nicotiana alata]
          Length = 481

 Score =  116 bits (291), Expect(2) = 5e-35
 Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   KSSGGQLRWNEWNNLQYTTSATFILTVYAKYLMSNPGSIDCAADTAGPYELLQTAKSQVD 180
           K++GG L W  WNNLQY T+ATF++T YA  L +   S+ CA  T     L+   KSQVD
Sbjct: 318 KTNGGLLWWQPWNNLQYVTAATFVITSYADTLFATKNSLQCATGTVEFSNLIMFVKSQVD 377

Query: 181 YILGSNPKNMSFMVGLG-NYPTKIHHRGASIV*FVSITKEYGSCTCD 318
           YILG NPK MS+MVG G NYP KIHHRGASI   VSI K+  + +C+
Sbjct: 378 YILGENPKKMSYMVGFGTNYPQKIHHRGASI---VSIKKDRATVSCN 421



 Score = 56.2 bits (134), Expect(2) = 5e-35
 Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
 Frame = +2

Query: 302 DPAPVTCDGG-KMWLNSNNPDPNVLQGKVVGGP----YDTDARNNFKQAEPATANTA 457
           D A V+C+ G  +W   N P+PN+L G +VGGP       D+R NF+QAE ATANTA
Sbjct: 414 DRATVSCNEGFNLWFYKNAPNPNILDGAIVGGPDLSDNYNDSRTNFQQAEAATANTA 470


>ref|XP_004168441.1| PREDICTED: endoglucanase 13-like, partial [Cucumis sativus]
          Length = 491

 Score =  110 bits (274), Expect(2) = 7e-35
 Identities = 57/106 (53%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   KSSGGQLRWNEWNNLQYTTSATFILTVYAKYLMSNPGSIDCAADTAGPYELLQTAKSQVD 180
           ++  G L +  WNNLQY TSA F+ TVY+ YL S   SI C +    P +L+  AKSQVD
Sbjct: 329 RTPAGLLWFQPWNNLQYVTSAAFLATVYSDYLSSKHASIQCPSARVHPSDLISFAKSQVD 388

Query: 181 YILGSNPKNMSFMVGLGN-YPTKIHHRGASIV*FVSITKEYGSCTC 315
           YILGSNP  MS+MVG G+ YPT+ HHRGASI   VSI +++   TC
Sbjct: 389 YILGSNPSGMSYMVGFGSKYPTQPHHRGASI---VSIKRDHTPVTC 431



 Score = 62.4 bits (150), Expect(2) = 7e-35
 Identities = 32/57 (56%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
 Frame = +2

Query: 302 DPAPVTCDGG-KMWLNSNNPDPNVLQGKVVGGPYDT----DARNNFKQAEPATANTA 457
           D  PVTC GG  +W N N P+PNVL G VVGGP       D+R+NFK AEPAT   A
Sbjct: 425 DHTPVTCHGGFDLWFNRNGPNPNVLHGAVVGGPDPNDVYWDSRSNFKTAEPATVTPA 481


>ref|XP_004153697.1| PREDICTED: endoglucanase 12-like [Cucumis sativus]
          Length = 489

 Score =  110 bits (274), Expect(2) = 7e-35
 Identities = 57/106 (53%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   KSSGGQLRWNEWNNLQYTTSATFILTVYAKYLMSNPGSIDCAADTAGPYELLQTAKSQVD 180
           ++  G L +  WNNLQY TSA F+ TVY+ YL S   SI C +    P +L+  AKSQVD
Sbjct: 327 RTPAGLLWFQPWNNLQYVTSAAFLATVYSDYLSSKHASIQCPSARVHPSDLISFAKSQVD 386

Query: 181 YILGSNPKNMSFMVGLGN-YPTKIHHRGASIV*FVSITKEYGSCTC 315
           YILGSNP  MS+MVG G+ YPT+ HHRGASI   VSI +++   TC
Sbjct: 387 YILGSNPSGMSYMVGFGSKYPTQPHHRGASI---VSIKRDHTPVTC 429



 Score = 62.4 bits (150), Expect(2) = 7e-35
 Identities = 32/57 (56%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
 Frame = +2

Query: 302 DPAPVTCDGG-KMWLNSNNPDPNVLQGKVVGGPYDT----DARNNFKQAEPATANTA 457
           D  PVTC GG  +W N N P+PNVL G VVGGP       D+R+NFK AEPAT   A
Sbjct: 423 DHTPVTCHGGFDLWFNRNGPNPNVLHGAVVGGPDPNDVYWDSRSNFKTAEPATVTPA 479


>gb|AAL30454.1|AF362949_1 endo-beta-1,4-glucanase precursor [Nicotiana tabacum]
          Length = 624

 Score =  107 bits (266), Expect(2) = 5e-31
 Identities = 55/106 (51%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1   KSSGGQLRWNEWNNLQYTTSATFILTVYAKYLMSNPGSIDCAADTAGPYELLQTAKSQVD 180
           KS GG +    WNN+Q+ TSA+F+ TVY+ YL S   S+ C++ T  P ELL  AKSQVD
Sbjct: 334 KSPGGLIFRQRWNNMQFVTSASFLATVYSDYLASARKSLKCSSGTVLPSELLSFAKSQVD 393

Query: 181 YILGSNPKNMSFMVGLG-NYPTKIHHRGASIV*FVSITKEYGSCTC 315
           YILG NP+  S+MVG G NYP ++HHRG+SI   VS+ K+    +C
Sbjct: 394 YILGDNPRATSYMVGYGNNYPRQVHHRGSSI---VSVKKDPSFVSC 436



 Score = 52.4 bits (124), Expect(2) = 5e-31
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
 Frame = +2

Query: 302 DPAPVTCDGG-KMWLNSNNPDPNVLQGKVVGGP--YD--TDARNNFKQAEPATANTA 457
           DP+ V+C GG   W +    DPN+L G +VGGP  YD   D R+N++Q EPAT N A
Sbjct: 430 DPSFVSCRGGYATWFSRKASDPNLLAGAIVGGPDAYDNFADQRDNYEQTEPATYNNA 486


>ref|XP_002299478.1| predicted protein [Populus trichocarpa] gi|222846736|gb|EEE84283.1|
           predicted protein [Populus trichocarpa]
           gi|347466587|gb|AEO97206.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466641|gb|AEO97233.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 622

 Score =  104 bits (260), Expect(2) = 7e-31
 Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +1

Query: 1   KSSGGQLRWNEWNNLQYTTSATFILTVYAKYLMSNPGSIDCAADTAGPYELLQTAKSQVD 180
           K+ GG +    WNN+Q+ TSA+F+ TVY+ YL S   +++CAA    P +LL  AKSQVD
Sbjct: 329 KTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLASAGRNLNCAAGNVAPTQLLAFAKSQVD 388

Query: 181 YILGSNPKNMSFMVGLG-NYPTKIHHRGASIV 273
           YILG NP+  S+MVG G NYP ++HHRG+SIV
Sbjct: 389 YILGDNPRATSYMVGYGNNYPRQVHHRGSSIV 420



 Score = 54.3 bits (129), Expect(2) = 7e-31
 Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
 Frame = +2

Query: 302 DPAPVTCDGG-KMWLNSNNPDPNVLQGKVVGGP--YD--TDARNNFKQAEPATANTA 457
           DP  VTC GG   W +    DPN+L G +VGGP  YD   D R+N++Q EPAT N A
Sbjct: 425 DPTFVTCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNA 481


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