BLASTX nr result

ID: Coptis21_contig00034290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034290
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15004.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257...    62   4e-08
ref|XP_002877602.1| hypothetical protein ARALYDRAFT_323421 [Arab...    62   6e-08
ref|NP_566899.1| uncharacterized protein [Arabidopsis thaliana] ...    61   1e-07
ref|XP_003601241.1| hypothetical protein MTR_3g077550 [Medicago ...    61   1e-07

>emb|CBI15004.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
 Frame = -2

Query: 242 EMGLNXXXXXXXXXXXXXXXXLKAYCDGSDVSVRFLKTPLEISRLSTATFEFEMFEGGN- 66
           EMGL+                L++ CDGS+VSV FL  PL  SRL++ATF FE+  GGN 
Sbjct: 328 EMGLSRYSWVVLLCWVFLLLCLRSGCDGSEVSVNFLTAPLAFSRLNSATFVFEVLVGGNN 387

Query: 65  -ICGNCSLTCKLDDHISPSCEA 3
             C +C   CKLD+     C+A
Sbjct: 388 DPCNDCIFNCKLDNGTPSDCQA 409


>ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257111 [Vitis vinifera]
          Length = 1087

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
 Frame = -2

Query: 167 CDGSDVSVRFLKTPLEISRLSTATFEFEMFEGGN--ICGNCSLTCKLDDHISPSCEA 3
           CDGS+VSV FL  PL  SRL++ATF FE+  GGN   C +C   CKLD+     C+A
Sbjct: 8   CDGSEVSVNFLTAPLAFSRLNSATFVFEVLVGGNNDPCNDCIFNCKLDNGTPSDCQA 64


>ref|XP_002877602.1| hypothetical protein ARALYDRAFT_323421 [Arabidopsis lyrata subsp.
           lyrata] gi|297323440|gb|EFH53861.1| hypothetical protein
           ARALYDRAFT_323421 [Arabidopsis lyrata subsp. lyrata]
          Length = 1968

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -2

Query: 170 YCDGSDVSVRFLKTPLEISRLSTATFEFEMFEGGN-ICGNCSLTCKLDDHISPSC 9
           YC GS++SV+F+K P   SR ++A F F+ FE GN  C +C   CKLDD IS  C
Sbjct: 21  YCYGSELSVKFVKAPPATSRFTSAKFSFQAFEDGNRTCSSCKFRCKLDDRISLDC 75


>ref|NP_566899.1| uncharacterized protein [Arabidopsis thaliana]
           gi|110742060|dbj|BAE98962.1| hypothetical protein
           [Arabidopsis thaliana] gi|332644860|gb|AEE78381.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 1088

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = -2

Query: 170 YCDGSDVSVRFLKTPLEISRLSTATFEFEMFEGGN-ICGNCSLTCKLDDHISPSC 9
           YC GS++SV+FLK P   SR ++A F F  FE GN  C +C   CKLDD IS  C
Sbjct: 26  YCYGSELSVKFLKAPPTTSRFTSAKFSFLAFEDGNRTCSSCKFRCKLDDRISLDC 80


>ref|XP_003601241.1| hypothetical protein MTR_3g077550 [Medicago truncatula]
           gi|355490289|gb|AES71492.1| hypothetical protein
           MTR_3g077550 [Medicago truncatula]
          Length = 1084

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
 Frame = -2

Query: 167 CDGSDVSVRFLKTPLEISRLSTATFEFEMFEGGN--ICGNCSLTCKLDDHISPSC 9
           C GSDV+V+FLK P   S L++ATF FE+   G+   C NCSL+CKLD+ I   C
Sbjct: 25  CGGSDVTVKFLKAPHAFSHLNSATFAFEVLNSGSNRSCANCSLSCKLDNGIRSVC 79


Top