BLASTX nr result
ID: Coptis21_contig00034290
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034290 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI15004.3| unnamed protein product [Vitis vinifera] 64 1e-08 ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257... 62 4e-08 ref|XP_002877602.1| hypothetical protein ARALYDRAFT_323421 [Arab... 62 6e-08 ref|NP_566899.1| uncharacterized protein [Arabidopsis thaliana] ... 61 1e-07 ref|XP_003601241.1| hypothetical protein MTR_3g077550 [Medicago ... 61 1e-07 >emb|CBI15004.3| unnamed protein product [Vitis vinifera] Length = 1255 Score = 63.9 bits (154), Expect = 1e-08 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Frame = -2 Query: 242 EMGLNXXXXXXXXXXXXXXXXLKAYCDGSDVSVRFLKTPLEISRLSTATFEFEMFEGGN- 66 EMGL+ L++ CDGS+VSV FL PL SRL++ATF FE+ GGN Sbjct: 328 EMGLSRYSWVVLLCWVFLLLCLRSGCDGSEVSVNFLTAPLAFSRLNSATFVFEVLVGGNN 387 Query: 65 -ICGNCSLTCKLDDHISPSCEA 3 C +C CKLD+ C+A Sbjct: 388 DPCNDCIFNCKLDNGTPSDCQA 409 >ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257111 [Vitis vinifera] Length = 1087 Score = 62.4 bits (150), Expect = 4e-08 Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 2/57 (3%) Frame = -2 Query: 167 CDGSDVSVRFLKTPLEISRLSTATFEFEMFEGGN--ICGNCSLTCKLDDHISPSCEA 3 CDGS+VSV FL PL SRL++ATF FE+ GGN C +C CKLD+ C+A Sbjct: 8 CDGSEVSVNFLTAPLAFSRLNSATFVFEVLVGGNNDPCNDCIFNCKLDNGTPSDCQA 64 >ref|XP_002877602.1| hypothetical protein ARALYDRAFT_323421 [Arabidopsis lyrata subsp. lyrata] gi|297323440|gb|EFH53861.1| hypothetical protein ARALYDRAFT_323421 [Arabidopsis lyrata subsp. lyrata] Length = 1968 Score = 61.6 bits (148), Expect = 6e-08 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%) Frame = -2 Query: 170 YCDGSDVSVRFLKTPLEISRLSTATFEFEMFEGGN-ICGNCSLTCKLDDHISPSC 9 YC GS++SV+F+K P SR ++A F F+ FE GN C +C CKLDD IS C Sbjct: 21 YCYGSELSVKFVKAPPATSRFTSAKFSFQAFEDGNRTCSSCKFRCKLDDRISLDC 75 >ref|NP_566899.1| uncharacterized protein [Arabidopsis thaliana] gi|110742060|dbj|BAE98962.1| hypothetical protein [Arabidopsis thaliana] gi|332644860|gb|AEE78381.1| uncharacterized protein [Arabidopsis thaliana] Length = 1088 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = -2 Query: 170 YCDGSDVSVRFLKTPLEISRLSTATFEFEMFEGGN-ICGNCSLTCKLDDHISPSC 9 YC GS++SV+FLK P SR ++A F F FE GN C +C CKLDD IS C Sbjct: 26 YCYGSELSVKFLKAPPTTSRFTSAKFSFLAFEDGNRTCSSCKFRCKLDDRISLDC 80 >ref|XP_003601241.1| hypothetical protein MTR_3g077550 [Medicago truncatula] gi|355490289|gb|AES71492.1| hypothetical protein MTR_3g077550 [Medicago truncatula] Length = 1084 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 2/55 (3%) Frame = -2 Query: 167 CDGSDVSVRFLKTPLEISRLSTATFEFEMFEGGN--ICGNCSLTCKLDDHISPSC 9 C GSDV+V+FLK P S L++ATF FE+ G+ C NCSL+CKLD+ I C Sbjct: 25 CGGSDVTVKFLKAPHAFSHLNSATFAFEVLNSGSNRSCANCSLSCKLDNGIRSVC 79