BLASTX nr result

ID: Coptis21_contig00034284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034284
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515288.1| WD-repeat protein, putative [Ricinus communi...   111   5e-23
emb|CBI36946.3| unnamed protein product [Vitis vinifera]              108   4e-22
emb|CBI22898.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_003534819.1| PREDICTED: uncharacterized protein LOC100819...   103   1e-20
ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248...   103   2e-20

>ref|XP_002515288.1| WD-repeat protein, putative [Ricinus communis]
           gi|223545768|gb|EEF47272.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 1546

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/67 (77%), Positives = 60/67 (89%)
 Frame = +1

Query: 1   SDTFARVWNACKSSSNDSEQHIHEMDVLSGHENDVNYVQFSGCAVASRSSTIDNLKEDGA 180
           SDT+ARVW+ACKSS+++S+Q I+E+DVLSGHENDVNYVQFSGCAVASRSS  D LKED  
Sbjct: 404 SDTYARVWSACKSSTDESDQPIYEIDVLSGHENDVNYVQFSGCAVASRSSFSDALKEDNI 463

Query: 181 SKFKNSW 201
            KFKNSW
Sbjct: 464 PKFKNSW 470


>emb|CBI36946.3| unnamed protein product [Vitis vinifera]
          Length = 1549

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/67 (76%), Positives = 56/67 (83%)
 Frame = +1

Query: 1   SDTFARVWNACKSSSNDSEQHIHEMDVLSGHENDVNYVQFSGCAVASRSSTIDNLKEDGA 180
           SDTFARVW+ACKSS++DSEQ  HE+DVLSGHENDVNYVQFS CA ASRSS  D  KE+  
Sbjct: 416 SDTFARVWSACKSSTDDSEQPNHEIDVLSGHENDVNYVQFSACAGASRSSVSDTFKEESL 475

Query: 181 SKFKNSW 201
            KFKNSW
Sbjct: 476 PKFKNSW 482


>emb|CBI22898.3| unnamed protein product [Vitis vinifera]
          Length = 1569

 Score =  105 bits (261), Expect = 5e-21
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = +1

Query: 1   SDTFARVWNACKSSSNDSEQHIHEMDVLSGHENDVNYVQFSGCAVASRSSTIDNLKEDGA 180
           SDT ARVWNACKS+ ++S+Q  HEMD+LSGHENDVNYVQFSGCAV+SR S  ++ KE+  
Sbjct: 412 SDTLARVWNACKSNPDESDQPNHEMDILSGHENDVNYVQFSGCAVSSRFSVAESSKEENV 471

Query: 181 SKFKNSW 201
            KFKNSW
Sbjct: 472 PKFKNSW 478


>ref|XP_003534819.1| PREDICTED: uncharacterized protein LOC100819598 [Glycine max]
          Length = 1777

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/64 (73%), Positives = 54/64 (84%)
 Frame = +1

Query: 10  FARVWNACKSSSNDSEQHIHEMDVLSGHENDVNYVQFSGCAVASRSSTIDNLKEDGASKF 189
           F +VWNACK S +D++Q IHE+DVLSGHENDVNYVQFSGCAVASR ST + LKE+   KF
Sbjct: 416 FLQVWNACKLSMDDTDQPIHEIDVLSGHENDVNYVQFSGCAVASRFSTAETLKEENIPKF 475

Query: 190 KNSW 201
           KNSW
Sbjct: 476 KNSW 479


>ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248563 [Vitis vinifera]
          Length = 1766

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/70 (72%), Positives = 56/70 (80%), Gaps = 3/70 (4%)
 Frame = +1

Query: 1   SDTFARV---WNACKSSSNDSEQHIHEMDVLSGHENDVNYVQFSGCAVASRSSTIDNLKE 171
           SDTFARV   W+ACKSS++DSEQ  HE+DVLSGHENDVNYVQFS CA ASRSS  D  KE
Sbjct: 416 SDTFARVHQVWSACKSSTDDSEQPNHEIDVLSGHENDVNYVQFSACAGASRSSVSDTFKE 475

Query: 172 DGASKFKNSW 201
           +   KFKNSW
Sbjct: 476 ESLPKFKNSW 485


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