BLASTX nr result

ID: Coptis21_contig00034279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034279
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541117.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   266   1e-69
ref|XP_003527264.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   266   2e-69
ref|XP_002329154.1| predicted protein [Populus trichocarpa] gi|2...   254   5e-66
ref|XP_004149289.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   253   1e-65
ref|XP_002284643.2| PREDICTED: peptidyl-prolyl cis-trans isomera...   247   6e-64

>ref|XP_003541117.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37,
           chloroplastic-like [Glycine max]
          Length = 439

 Score =  266 bits (681), Expect = 1e-69
 Identities = 131/182 (71%), Positives = 149/182 (81%), Gaps = 18/182 (9%)
 Frame = +1

Query: 1   GDGSTFSPVAGESKSQAVIKVV------------------DGAYDGVKLKVTDQAVLSDS 126
           GDGSTFSPV GE K+ A ++VV                  DGAY+G KL   +QAV+SD+
Sbjct: 255 GDGSTFSPVGGEQKNTATVQVVIDGYSAPLTAGNFAKLVMDGAYNGAKLNCINQAVISDN 314

Query: 127 GVDKGIGYSIPLEIMPSGQFEPLYKTTLSVQDGELPVLPMSVYGAVVMAHSEVSEEYSSP 306
           GVDK  GYS+PLEIMPSGQFEPLYKTTLSVQDGELPVLP+SVYGA+ MAHSE SEEYSSP
Sbjct: 315 GVDKNTGYSVPLEIMPSGQFEPLYKTTLSVQDGELPVLPLSVYGALAMAHSEASEEYSSP 374

Query: 307 FQFFYYLYDKSYAGLGGLSFDEGQFSVFGYTTVGREVLPQIKTGDLIRSAKLVEGQDRLI 486
           +QFF+YLYDK  AGLGG+SFDEGQFSVFGYTT GR++LPQIKTGD+IRSAKL+EGQDRL+
Sbjct: 375 YQFFFYLYDKRSAGLGGISFDEGQFSVFGYTTTGRDILPQIKTGDVIRSAKLIEGQDRLV 434

Query: 487 LP 492
           LP
Sbjct: 435 LP 436


>ref|XP_003527264.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37,
           chloroplastic-like [Glycine max]
          Length = 439

 Score =  266 bits (679), Expect = 2e-69
 Identities = 131/182 (71%), Positives = 149/182 (81%), Gaps = 18/182 (9%)
 Frame = +1

Query: 1   GDGSTFSPVAGESKSQAVIKVV------------------DGAYDGVKLKVTDQAVLSDS 126
           GDGSTFSPV GE K+ A I+VV                  DGAY+G KL   +QAV+SD+
Sbjct: 255 GDGSTFSPVGGEQKNTATIQVVIDGYSAPLTAGNFAKLVMDGAYNGTKLNCINQAVISDN 314

Query: 127 GVDKGIGYSIPLEIMPSGQFEPLYKTTLSVQDGELPVLPMSVYGAVVMAHSEVSEEYSSP 306
           GVDK  GYS+PLEIMPSGQFEPLYKTTLSVQDGELPVLP+SVYGA+ MAHSE S+EYSSP
Sbjct: 315 GVDKNTGYSVPLEIMPSGQFEPLYKTTLSVQDGELPVLPLSVYGALAMAHSEASDEYSSP 374

Query: 307 FQFFYYLYDKSYAGLGGLSFDEGQFSVFGYTTVGREVLPQIKTGDLIRSAKLVEGQDRLI 486
           +QFF+YLYDK  AGLGG+SFDEGQFSVFGYTT GR++LPQIKTGD+IRSAKL+EGQDRL+
Sbjct: 375 YQFFFYLYDKRSAGLGGISFDEGQFSVFGYTTTGRDILPQIKTGDVIRSAKLIEGQDRLV 434

Query: 487 LP 492
           LP
Sbjct: 435 LP 436


>ref|XP_002329154.1| predicted protein [Populus trichocarpa] gi|222869823|gb|EEF06954.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  254 bits (649), Expect = 5e-66
 Identities = 130/184 (70%), Positives = 150/184 (81%), Gaps = 19/184 (10%)
 Frame = +1

Query: 4   DGSTFSPVAG-----ESKSQAVIK--------------VVDGAYDGVKLKVTDQAVLSDS 126
           DGSTFSP AG      +K Q VI               VVDGAY+G KL  TDQAVL+D+
Sbjct: 204 DGSTFSPEAGGEPKKNAKIQVVIDGFSAPLTAGNFVKLVVDGAYNGAKLSFTDQAVLTDN 263

Query: 127 GVDKGIGYSIPLEIMPSGQFEPLYKTTLSVQDGELPVLPMSVYGAVVMAHSEVSEEYSSP 306
           G+DK  GYS+PLEIMPSGQFEPLY+TTLSVQDGELPVLP+SVYGAV MAHSEVSE++S+P
Sbjct: 264 GLDKNSGYSVPLEIMPSGQFEPLYRTTLSVQDGELPVLPLSVYGAVAMAHSEVSEDFSAP 323

Query: 307 FQFFYYLYDKSYAGLGGLSFDEGQFSVFGYTTVGREVLPQIKTGDLIRSAKLVEGQDRLI 486
           +QFF+YLYDK  AGLGGLSFDEGQFSVFGYTT GRE+L QIK+GD+I+SA+LVEGQDRLI
Sbjct: 324 YQFFFYLYDKRNAGLGGLSFDEGQFSVFGYTTAGREILSQIKSGDIIQSAELVEGQDRLI 383

Query: 487 LPDK 498
           LP++
Sbjct: 384 LPNE 387


>ref|XP_004149289.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37,
           chloroplastic-like [Cucumis sativus]
           gi|449521535|ref|XP_004167785.1| PREDICTED:
           peptidyl-prolyl cis-trans isomerase CYP37,
           chloroplastic-like [Cucumis sativus]
          Length = 459

 Score =  253 bits (645), Expect = 1e-65
 Identities = 131/185 (70%), Positives = 148/185 (80%), Gaps = 19/185 (10%)
 Frame = +1

Query: 1   GDGSTFSPVAG-ESKSQAVIKVV------------------DGAYDGVKLKVTDQAVLSD 123
           GDGS+FSP AG ES S A I+VV                  DGAYDG KL  T QA+LS+
Sbjct: 274 GDGSSFSPQAGGESSSTATIQVVVDGYSAPLTAGNFAKLVIDGAYDGSKLSSTSQAILSE 333

Query: 124 SGVDKGIGYSIPLEIMPSGQFEPLYKTTLSVQDGELPVLPMSVYGAVVMAHSEVSEEYSS 303
           +  DK  GY+IPLEI PSGQFEPLY+TTLSVQDGELPVLP+SVYGAV MAH+E SEEYSS
Sbjct: 334 NSQDKNKGYNIPLEIKPSGQFEPLYRTTLSVQDGELPVLPLSVYGAVAMAHNEDSEEYSS 393

Query: 304 PFQFFYYLYDKSYAGLGGLSFDEGQFSVFGYTTVGREVLPQIKTGDLIRSAKLVEGQDRL 483
           P QFF+YLYDK  +GLGGLSFDEGQFSVFGYTTVGR++LPQIKTGD+IRSAKLVEGQDRL
Sbjct: 394 PHQFFFYLYDKRNSGLGGLSFDEGQFSVFGYTTVGRDILPQIKTGDIIRSAKLVEGQDRL 453

Query: 484 ILPDK 498
           +LP++
Sbjct: 454 VLPNE 458


>ref|XP_002284643.2| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic
           [Vitis vinifera]
          Length = 400

 Score =  247 bits (631), Expect = 6e-64
 Identities = 129/185 (69%), Positives = 148/185 (80%), Gaps = 19/185 (10%)
 Frame = +1

Query: 1   GDGSTFSPVAG-ESKSQAVIKVV------------------DGAYDGVKLKVTDQAVLSD 123
           GDGS+FSP AG ES+  A I+VV                  DGAYDG KL + +QA+LSD
Sbjct: 218 GDGSSFSPEAGGESRKTATIQVVIDGYSTPLTSGNFAKLVIDGAYDGAKLNLINQAILSD 277

Query: 124 SGVDKGIGYSIPLEIMPSGQFEPLYKTTLSVQDGELPVLPMSVYGAVVMAHSEVSEEYSS 303
           +   K IGYS+PLEIMPSGQFEPLY+TTL+VQDGELPVLP+SVYGAV MAHSE S+EYSS
Sbjct: 278 N---KNIGYSLPLEIMPSGQFEPLYRTTLNVQDGELPVLPLSVYGAVAMAHSETSDEYSS 334

Query: 304 PFQFFYYLYDKSYAGLGGLSFDEGQFSVFGYTTVGREVLPQIKTGDLIRSAKLVEGQDRL 483
           P+QFF+YLYDK  AGLGGLSFDEGQFSVFGYTT GRE+L QIKTGD+IRSAKLVEG+D L
Sbjct: 335 PYQFFFYLYDKRSAGLGGLSFDEGQFSVFGYTTAGREILSQIKTGDIIRSAKLVEGRDCL 394

Query: 484 ILPDK 498
           ILP++
Sbjct: 395 ILPEE 399


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