BLASTX nr result

ID: Coptis21_contig00034275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034275
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557127.1| PREDICTED: spastin-like isoform 2 [Brachypod...   248   4e-64
ref|XP_003557126.1| PREDICTED: spastin-like isoform 1 [Brachypod...   248   4e-64
ref|NP_001141317.1| uncharacterized protein LOC100273408 [Zea ma...   248   4e-64
dbj|BAJ97725.1| predicted protein [Hordeum vulgare subsp. vulgare]    246   2e-63
ref|XP_002436406.1| hypothetical protein SORBIDRAFT_10g001950 [S...   246   2e-63

>ref|XP_003557127.1| PREDICTED: spastin-like isoform 2 [Brachypodium distachyon]
          Length = 501

 Score =  248 bits (633), Expect = 4e-64
 Identities = 128/136 (94%), Positives = 133/136 (97%)
 Frame = +1

Query: 1   KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAISRQPSVIFMDEIDSIM 180
           KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAI RQPSVIFMDEIDS+M
Sbjct: 275 KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAIDRQPSVIFMDEIDSVM 334

Query: 181 STRLANENDASRRLKSEFLVQFDGVSSNPDDLVIVIGATNKPQELDDAVLRRLVKKIYVP 360
           STRLANENDASRRLKSEFL+QFDGV+SNPDDLVIVIGATNKPQELDDAVLRRLVK+IYVP
Sbjct: 335 STRLANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVP 394

Query: 361 LPDENVRRRLLKNKLK 408
           LPD NVRR LLKN+LK
Sbjct: 395 LPDPNVRRLLLKNQLK 410


>ref|XP_003557126.1| PREDICTED: spastin-like isoform 1 [Brachypodium distachyon]
          Length = 485

 Score =  248 bits (633), Expect = 4e-64
 Identities = 128/136 (94%), Positives = 133/136 (97%)
 Frame = +1

Query: 1   KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAISRQPSVIFMDEIDSIM 180
           KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAI RQPSVIFMDEIDS+M
Sbjct: 259 KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAIDRQPSVIFMDEIDSVM 318

Query: 181 STRLANENDASRRLKSEFLVQFDGVSSNPDDLVIVIGATNKPQELDDAVLRRLVKKIYVP 360
           STRLANENDASRRLKSEFL+QFDGV+SNPDDLVIVIGATNKPQELDDAVLRRLVK+IYVP
Sbjct: 319 STRLANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVP 378

Query: 361 LPDENVRRRLLKNKLK 408
           LPD NVRR LLKN+LK
Sbjct: 379 LPDPNVRRLLLKNQLK 394


>ref|NP_001141317.1| uncharacterized protein LOC100273408 [Zea mays]
           gi|194703948|gb|ACF86058.1| unknown [Zea mays]
           gi|413953392|gb|AFW86041.1| hypothetical protein
           ZEAMMB73_854699 [Zea mays]
          Length = 490

 Score =  248 bits (633), Expect = 4e-64
 Identities = 128/136 (94%), Positives = 133/136 (97%)
 Frame = +1

Query: 1   KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAISRQPSVIFMDEIDSIM 180
           KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAI RQPSVIFMDEIDS+M
Sbjct: 264 KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAIDRQPSVIFMDEIDSVM 323

Query: 181 STRLANENDASRRLKSEFLVQFDGVSSNPDDLVIVIGATNKPQELDDAVLRRLVKKIYVP 360
           STRLANEND+SRRLKSEFL+QFDGVSSNPDDLVIVIGATNKPQELDDAVLRRLVK+IYVP
Sbjct: 324 STRLANENDSSRRLKSEFLIQFDGVSSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVP 383

Query: 361 LPDENVRRRLLKNKLK 408
           LPD NVRR LLKN+LK
Sbjct: 384 LPDPNVRRLLLKNQLK 399


>dbj|BAJ97725.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 478

 Score =  246 bits (627), Expect = 2e-63
 Identities = 126/136 (92%), Positives = 133/136 (97%)
 Frame = +1

Query: 1   KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAISRQPSVIFMDEIDSIM 180
           KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVA+ RQPSVIFMDEIDS+M
Sbjct: 252 KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVERQPSVIFMDEIDSVM 311

Query: 181 STRLANENDASRRLKSEFLVQFDGVSSNPDDLVIVIGATNKPQELDDAVLRRLVKKIYVP 360
           STRLA+ENDASRRLKSEFL+QFDGV+SNPDDLVIVIGATNKPQELDDAVLRRLVK+IYVP
Sbjct: 312 STRLASENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVP 371

Query: 361 LPDENVRRRLLKNKLK 408
           LPD NVRR LLKN+LK
Sbjct: 372 LPDPNVRRLLLKNQLK 387


>ref|XP_002436406.1| hypothetical protein SORBIDRAFT_10g001950 [Sorghum bicolor]
           gi|241914629|gb|EER87773.1| hypothetical protein
           SORBIDRAFT_10g001950 [Sorghum bicolor]
          Length = 490

 Score =  246 bits (627), Expect = 2e-63
 Identities = 126/136 (92%), Positives = 133/136 (97%)
 Frame = +1

Query: 1   KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAISRQPSVIFMDEIDSIM 180
           KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAI RQPSVIFMDEIDS+M
Sbjct: 264 KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAIDRQPSVIFMDEIDSVM 323

Query: 181 STRLANENDASRRLKSEFLVQFDGVSSNPDDLVIVIGATNKPQELDDAVLRRLVKKIYVP 360
           STRLANEND+SRRLKSEFL+QFDGVSSNPDDLVIVIGATNKPQELDDAVLRRLVK+IYVP
Sbjct: 324 STRLANENDSSRRLKSEFLIQFDGVSSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVP 383

Query: 361 LPDENVRRRLLKNKLK 408
           LPD NVR+ LLKN+L+
Sbjct: 384 LPDPNVRKLLLKNQLR 399


Top