BLASTX nr result

ID: Coptis21_contig00034270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034270
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523550.1| peptidyl-prolyl cis-trans isomerase, putativ...   101   7e-20
ref|NP_001061466.1| Os08g0292600 [Oryza sativa Japonica Group] g...    94   1e-17
gb|EEE68416.1| hypothetical protein OsJ_26776 [Oryza sativa Japo...    94   1e-17
dbj|BAH00420.1| unnamed protein product [Oryza sativa Japonica G...    94   1e-17
ref|XP_002309317.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>ref|XP_002523550.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
           gi|223537257|gb|EEF38889.1| peptidyl-prolyl cis-trans
           isomerase, putative [Ricinus communis]
          Length = 296

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/64 (71%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -2

Query: 195 QPDVTITDRVYIDFSICPNYFRTDRTLGDEYTA-CQETEPLGRVVIGLYGKQVPLTVSNF 19
           QPD TITDRVY+DFS+CPNYFR DRTL D  ++ C E+ PLGRV++GLYG+ VPLTVSNF
Sbjct: 55  QPDTTITDRVYMDFSLCPNYFRPDRTLSDTVSSLCTESTPLGRVILGLYGRLVPLTVSNF 114

Query: 18  KQMC 7
           K MC
Sbjct: 115 KTMC 118


>ref|NP_001061466.1| Os08g0292600 [Oryza sativa Japonica Group]
           gi|28564614|dbj|BAC57781.1| unknown protein [Oryza
           sativa Japonica Group] gi|38175505|dbj|BAD01200.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113623435|dbj|BAF23380.1| Os08g0292600 [Oryza sativa
           Japonica Group] gi|215697323|dbj|BAG91317.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 327

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -2

Query: 189 DVTITDRVYIDFSICPNYFRTDRTLGDEYTACQETEPLGRVVIGLYGKQVPLTVSNFKQM 10
           D TITDR+++DFS+CP+YFR+DRTLG E   C ++EPLGRV+ GLYG+ +PLT +NFK  
Sbjct: 88  DTTITDRIFMDFSVCPSYFRSDRTLGAELATCPDSEPLGRVIFGLYGRLLPLTTANFKAA 147

Query: 9   C 7
           C
Sbjct: 148 C 148


>gb|EEE68416.1| hypothetical protein OsJ_26776 [Oryza sativa Japonica Group]
          Length = 314

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -2

Query: 189 DVTITDRVYIDFSICPNYFRTDRTLGDEYTACQETEPLGRVVIGLYGKQVPLTVSNFKQM 10
           D TITDR+++DFS+CP+YFR+DRTLG E   C ++EPLGRV+ GLYG+ +PLT +NFK  
Sbjct: 75  DTTITDRIFMDFSVCPSYFRSDRTLGAELATCPDSEPLGRVIFGLYGRLLPLTTANFKAA 134

Query: 9   C 7
           C
Sbjct: 135 C 135


>dbj|BAH00420.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 258

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -2

Query: 189 DVTITDRVYIDFSICPNYFRTDRTLGDEYTACQETEPLGRVVIGLYGKQVPLTVSNFKQM 10
           D TITDR+++DFS+CP+YFR+DRTLG E   C ++EPLGRV+ GLYG+ +PLT +NFK  
Sbjct: 88  DTTITDRIFMDFSVCPSYFRSDRTLGAELATCPDSEPLGRVIFGLYGRLLPLTTANFKAA 147

Query: 9   C 7
           C
Sbjct: 148 C 148


>ref|XP_002309317.1| predicted protein [Populus trichocarpa] gi|222855293|gb|EEE92840.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
 Frame = -2

Query: 189 DVTITDRVYIDFSICPNYFRTDRTLGDEY-TACQETEPLGRVVIGLYGKQVPLTVSNFKQ 13
           D TITDRV++DFSIC NYFR DRTL D + T C ++ PLGR+V+GLYG  VPLTVSNFK 
Sbjct: 30  DTTITDRVFLDFSICSNYFRPDRTLSDTFSTLCTDSTPLGRLVLGLYGHLVPLTVSNFKT 89

Query: 12  MC 7
           MC
Sbjct: 90  MC 91


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