BLASTX nr result

ID: Coptis21_contig00034269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034269
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN73053.2| mini-chromosome maintenance protein MCM3 [Pisum s...   201   5e-50
emb|CBI30852.3| unnamed protein product [Vitis vinifera]              199   3e-49
ref|XP_002276065.1| PREDICTED: DNA replication licensing factor ...   199   3e-49
ref|XP_003608493.1| DNA replication licensing factor MCM3-like p...   199   3e-49
ref|XP_002305335.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49

>gb|AAN73053.2| mini-chromosome maintenance protein MCM3 [Pisum sativum]
          Length = 710

 Score =  201 bits (511), Expect = 5e-50
 Identities = 96/106 (90%), Positives = 104/106 (98%)
 Frame = -3

Query: 320 GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDACKPGDRVAIVGV 141
           GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVI EDDLVD+CKPGDRVAIVG+
Sbjct: 109 GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIAEDDLVDSCKPGDRVAIVGI 168

Query: 140 YKALPGKSQGSVNGVFRTILIANNVSLLNKEANAPNYTTDDLKNIR 3
           YKALPGKS+GSVNGVFRT+LIANNV+LLNKEANAP Y+T+DLKNI+
Sbjct: 169 YKALPGKSKGSVNGVFRTVLIANNVALLNKEANAPIYSTEDLKNIK 214


>emb|CBI30852.3| unnamed protein product [Vitis vinifera]
          Length = 776

 Score =  199 bits (505), Expect = 3e-49
 Identities = 95/106 (89%), Positives = 103/106 (97%)
 Frame = -3

Query: 320 GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDACKPGDRVAIVGV 141
           GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVD+CKPGDRVAIVG+
Sbjct: 177 GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDSCKPGDRVAIVGI 236

Query: 140 YKALPGKSQGSVNGVFRTILIANNVSLLNKEANAPNYTTDDLKNIR 3
           YKA+PGKS+GSVNGVFRT+LIANNVSLLNKEAN P YT +DLK+I+
Sbjct: 237 YKAIPGKSKGSVNGVFRTVLIANNVSLLNKEANTPIYTPEDLKHIK 282


>ref|XP_002276065.1| PREDICTED: DNA replication licensing factor MCM3 homolog 1-like
           [Vitis vinifera]
          Length = 773

 Score =  199 bits (505), Expect = 3e-49
 Identities = 95/106 (89%), Positives = 103/106 (97%)
 Frame = -3

Query: 320 GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDACKPGDRVAIVGV 141
           GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVD+CKPGDRVAIVG+
Sbjct: 174 GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDSCKPGDRVAIVGI 233

Query: 140 YKALPGKSQGSVNGVFRTILIANNVSLLNKEANAPNYTTDDLKNIR 3
           YKA+PGKS+GSVNGVFRT+LIANNVSLLNKEAN P YT +DLK+I+
Sbjct: 234 YKAIPGKSKGSVNGVFRTVLIANNVSLLNKEANTPIYTPEDLKHIK 279


>ref|XP_003608493.1| DNA replication licensing factor MCM3-like protein [Medicago
           truncatula] gi|355509548|gb|AES90690.1| DNA replication
           licensing factor MCM3-like protein [Medicago truncatula]
          Length = 773

 Score =  199 bits (505), Expect = 3e-49
 Identities = 94/106 (88%), Positives = 103/106 (97%)
 Frame = -3

Query: 320 GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDACKPGDRVAIVGV 141
           GNLLVTEYG+CKYKDHQTLSMQEVPENSAPGQLPRTVD+I EDDLVD+CKPGDRVAIVG+
Sbjct: 176 GNLLVTEYGMCKYKDHQTLSMQEVPENSAPGQLPRTVDIIAEDDLVDSCKPGDRVAIVGI 235

Query: 140 YKALPGKSQGSVNGVFRTILIANNVSLLNKEANAPNYTTDDLKNIR 3
           YKALPGKS+GSVNGVFRT+LIANNVSLLNKEANAP Y+ +DLKNI+
Sbjct: 236 YKALPGKSKGSVNGVFRTVLIANNVSLLNKEANAPIYSPEDLKNIK 281


>ref|XP_002305335.1| predicted protein [Populus trichocarpa] gi|222848299|gb|EEE85846.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  197 bits (501), Expect = 7e-49
 Identities = 95/106 (89%), Positives = 102/106 (96%)
 Frame = -3

Query: 320 GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDACKPGDRVAIVGV 141
           G+LLVTEYGLC YKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVD CKPGDRVAIVG+
Sbjct: 168 GHLLVTEYGLCNYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDCCKPGDRVAIVGI 227

Query: 140 YKALPGKSQGSVNGVFRTILIANNVSLLNKEANAPNYTTDDLKNIR 3
           YKALPGKS+GSVNGVFRT+LIANNVSLLNKEANAP Y+ +DLKNI+
Sbjct: 228 YKALPGKSKGSVNGVFRTVLIANNVSLLNKEANAPIYSPEDLKNIK 273