BLASTX nr result

ID: Coptis21_contig00034259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034259
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324030.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
emb|CBI15297.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002266458.1| PREDICTED: HIPL1 protein-like [Vitis vinifera]    140   1e-31
ref|XP_002517448.1| HIPL1 protein precursor, putative [Ricinus c...   140   1e-31
ref|NP_198813.3| uncharacterized protein [Arabidopsis thaliana] ...   139   2e-31

>ref|XP_002324030.1| predicted protein [Populus trichocarpa] gi|222867032|gb|EEF04163.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/87 (74%), Positives = 72/87 (82%)
 Frame = +3

Query: 12  DILVLDESNPFLDLTDIVRMDSKLGLMSIAFHPNFARNGRLFVSFNCDKVQWPECPGRCS 191
           + L LDESNPFLDLTD V  D+ LG+M IAFHPNF +NGR F SFNCDKV+WPEC GRCS
Sbjct: 238 ETLGLDESNPFLDLTDEVYYDTALGMMGIAFHPNFHQNGRFFASFNCDKVKWPECSGRCS 297

Query: 192 CNTDANCDPSKLTSQNGALPCQYHSII 272
           CN+D  CDPSKL S+NGA PCQYHSII
Sbjct: 298 CNSDMGCDPSKLPSENGAQPCQYHSII 324


>emb|CBI15297.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  140 bits (353), Expect = 1e-31
 Identities = 59/85 (69%), Positives = 69/85 (81%)
 Frame = +3

Query: 18  LVLDESNPFLDLTDIVRMDSKLGLMSIAFHPNFARNGRLFVSFNCDKVQWPECPGRCSCN 197
           L LDE+NPFLDLTD V  D++ G+M +AFHPNF +NGR F SFNCDK++WP C GRCSCN
Sbjct: 269 LELDEANPFLDLTDEVHFDAEFGMMGMAFHPNFVQNGRFFASFNCDKIKWPRCSGRCSCN 328

Query: 198 TDANCDPSKLTSQNGALPCQYHSII 272
           ++ANCDPSKL   N A PCQYHSII
Sbjct: 329 SEANCDPSKLQPDNNASPCQYHSII 353


>ref|XP_002266458.1| PREDICTED: HIPL1 protein-like [Vitis vinifera]
          Length = 724

 Score =  140 bits (353), Expect = 1e-31
 Identities = 59/85 (69%), Positives = 69/85 (81%)
 Frame = +3

Query: 18  LVLDESNPFLDLTDIVRMDSKLGLMSIAFHPNFARNGRLFVSFNCDKVQWPECPGRCSCN 197
           L LDE+NPFLDLTD V  D++ G+M +AFHPNF +NGR F SFNCDK++WP C GRCSCN
Sbjct: 251 LELDEANPFLDLTDEVHFDAEFGMMGMAFHPNFVQNGRFFASFNCDKIKWPRCSGRCSCN 310

Query: 198 TDANCDPSKLTSQNGALPCQYHSII 272
           ++ANCDPSKL   N A PCQYHSII
Sbjct: 311 SEANCDPSKLQPDNNASPCQYHSII 335


>ref|XP_002517448.1| HIPL1 protein precursor, putative [Ricinus communis]
           gi|223543459|gb|EEF44990.1| HIPL1 protein precursor,
           putative [Ricinus communis]
          Length = 689

 Score =  140 bits (352), Expect = 1e-31
 Identities = 60/85 (70%), Positives = 69/85 (81%)
 Frame = +3

Query: 18  LVLDESNPFLDLTDIVRMDSKLGLMSIAFHPNFARNGRLFVSFNCDKVQWPECPGRCSCN 197
           L LDESNPFLDLTD V  DS+ G+M IAFHPNF +N   +VSFNCDKV+WP+C GRCSCN
Sbjct: 239 LTLDESNPFLDLTDEVYSDSEFGMMGIAFHPNFQQNSLFYVSFNCDKVRWPQCSGRCSCN 298

Query: 198 TDANCDPSKLTSQNGALPCQYHSII 272
           +D  CDPSKLT  NGA PC+YHS+I
Sbjct: 299 SDVGCDPSKLTPDNGAQPCRYHSVI 323


>ref|NP_198813.3| uncharacterized protein [Arabidopsis thaliana]
           gi|332007114|gb|AED94497.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 690

 Score =  139 bits (351), Expect = 2e-31
 Identities = 56/87 (64%), Positives = 74/87 (85%)
 Frame = +3

Query: 12  DILVLDESNPFLDLTDIVRMDSKLGLMSIAFHPNFARNGRLFVSFNCDKVQWPECPGRCS 191
           ++L +DE+NPFLDLT+ V  D++LGL+ IAFHP+F +NGR F SFNCD+V+WPEC G+C+
Sbjct: 246 ELLKIDETNPFLDLTEEVHFDAELGLLGIAFHPDFLKNGRFFASFNCDRVKWPECSGKCA 305

Query: 192 CNTDANCDPSKLTSQNGALPCQYHSII 272
           CN+D +CDP+KL S NGA PCQYHS+I
Sbjct: 306 CNSDIDCDPAKLDSDNGATPCQYHSVI 332


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