BLASTX nr result

ID: Coptis21_contig00034258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034258
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322180.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
emb|CBI14988.3| unnamed protein product [Vitis vinifera]               54   1e-05
ref|XP_002281747.1| PREDICTED: FAS-associated factor 2-B [Vitis ...    54   1e-05

>ref|XP_002322180.1| predicted protein [Populus trichocarpa] gi|222869176|gb|EEF06307.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
 Frame = -3

Query: 279 QIREEQDAATFASLQTDYS-DTSNEVLIERRTGQ--EQSKMSNTDKSRKTPAKEQQGSSK 109
           Q+REEQDAA  A+L+ D   +  N +L ER+  +  + S  +N +K R+  +++Q G SK
Sbjct: 248 QLREEQDAAYLAALKIDKEKEKLNSLLPERKFQKPADSSNKANYEKLRQNASQKQFGKSK 307

Query: 108 VKQTIQKAQGRRERISLGKDSDITKILVRFPNGEKR 1
              T+      RE  +  KDS  T+IL+RFPNGE++
Sbjct: 308 EASTV------RETANGSKDSQATQILIRFPNGERK 337


>emb|CBI14988.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/93 (34%), Positives = 51/93 (54%)
 Frame = -3

Query: 279 QIREEQDAATFASLQTDYSDTSNEVLIERRTGQEQSKMSNTDKSRKTPAKEQQGSSKVKQ 100
           ++REEQDAA  A+LQ D   +  + L   +  Q++   +    ++  P+K+Q G    + 
Sbjct: 183 RLREEQDAAYLAALQIDEEKSRPKDLRSEQVVQKKPVQA----AKHNPSKKQTGKKVKEA 238

Query: 99  TIQKAQGRRERISLGKDSDITKILVRFPNGEKR 1
           T        E  +  KDS +T+IL+RFPNGE+R
Sbjct: 239 TTVTETPHNETANEEKDSRVTQILIRFPNGERR 271


>ref|XP_002281747.1| PREDICTED: FAS-associated factor 2-B [Vitis vinifera]
          Length = 382

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/93 (34%), Positives = 51/93 (54%)
 Frame = -3

Query: 279 QIREEQDAATFASLQTDYSDTSNEVLIERRTGQEQSKMSNTDKSRKTPAKEQQGSSKVKQ 100
           ++REEQDAA  A+LQ D   +  + L   +  Q++   +    ++  P+K+Q G    + 
Sbjct: 230 RLREEQDAAYLAALQIDEEKSRPKDLRSEQVVQKKPVQA----AKHNPSKKQTGKKVKEA 285

Query: 99  TIQKAQGRRERISLGKDSDITKILVRFPNGEKR 1
           T        E  +  KDS +T+IL+RFPNGE+R
Sbjct: 286 TTVTETPHNETANEEKDSRVTQILIRFPNGERR 318


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