BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034257
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi...   158   1e-36
emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]   155   1e-35
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,...   153   3e-35
ref|XP_002884709.1| pentatricopeptide repeat-containing protein ...   150   3e-34

>ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|222867590|gb|EEF04721.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score =  164 bits (414), Expect = 2e-38
 Identities = 77/123 (62%), Positives = 95/123 (77%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           +PDV M+N L+HGLCSAGK+++A+ + + MK  N  PNLVT+NTLMDGLYK R+CE AS 
Sbjct: 566 EPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASV 625

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           IWA + KNG QPDIISYNI + GLC+C R S  + LFD AL  G+LPTSITW I+VRA+L
Sbjct: 626 IWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVL 685

Query: 340 NSG 332
             G
Sbjct: 686 KLG 688



 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 41/115 (35%), Positives = 69/115 (60%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           P V+ YNTLI+GLC A +  +A   + EM  ++  P+++TY+ LMDGL + +  + A  +
Sbjct: 497 PTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNL 556

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVV 353
           W Q+L  GL+PD+  +NI ++GLC+  +   A+ L+        LP  +T N ++
Sbjct: 557 WRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLM 611



 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 34/99 (34%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           KPDV  Y T+I+G+  +G +  A+E+  EM  R + P+++ YN ++DG +K  D  +   
Sbjct: 181 KPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKE 240

Query: 520 IWAQILKNG-LQPDIISYNIAINGLCACNRFSHAMWLFD 407
           IW +++K   + P++++YN+ INGLC   RF  ++ +++
Sbjct: 241 IWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWE 279



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 38/116 (32%), Positives = 68/116 (58%)
 Frame = -2

Query: 679 NTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIWAQILK 500
           N LI+G   A K++EA+    EM+ +  +P +V+YNTL++GL K      A     ++L+
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLE 527

Query: 499 NGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAILNSG 332
              +PD+I+Y++ ++GLC   +   A+ L+   LV+GL P     NI++  + ++G
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAG 583



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 37/121 (30%), Positives = 63/121 (52%)
 Frame = -2

Query: 694 DVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIW 515
           DV+ YN L++G C AGK+KE+ E+   M   N   N+V+YN  + GL++ R  E+A  +W
Sbjct: 324 DVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVW 382

Query: 514 AQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAILNS 335
             + + G   D  +Y + I+GLC     + A+ +   A   G    +  ++ +V  +   
Sbjct: 383 ELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQ 442

Query: 334 G 332
           G
Sbjct: 443 G 443



 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 38/123 (30%), Positives = 59/123 (47%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           KP +  YN L++    A  +++A   LA  +   I PNL TYN L+    K R   +A G
Sbjct: 111 KPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKG 170

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           +   +    L+PD+ SY   ING+        A+ +FD     GL+P  + +NI++    
Sbjct: 171 LLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFF 230

Query: 340 NSG 332
             G
Sbjct: 231 KRG 233



 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 31/121 (25%), Positives = 67/121 (55%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           P+V+ YN +I+GLC  G+  E++E+   MK      +L TY++L+ GL    + + A  +
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEV 312

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAILN 338
           + +++K  +  D+++YN  +NG C   +   +  L+ + + +      +++NI +R +  
Sbjct: 313 YKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW-VMMGKENCHNVVSYNIFIRGLFE 371

Query: 337 S 335
           +
Sbjct: 372 N 372



 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEM-KNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           PDV+ YN +I G    G   +  EI   + K   + PN+VTYN +++GL K    +++  
Sbjct: 217 PDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLE 276

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           +W ++ KN  + D+ +Y+  I GLC       A+ ++   +   ++   +T+N ++    
Sbjct: 277 MWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFC 336

Query: 340 NSG 332
            +G
Sbjct: 337 RAG 339



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 35/117 (29%), Positives = 59/117 (50%)
 Frame = -2

Query: 694 DVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIW 515
           D   Y  LIHGLC  G + +A++IL E K+     +   Y++++DGL K    ++A GI 
Sbjct: 393 DSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIV 452

Query: 514 AQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAI 344
            Q+ K G +      N  ING    ++   A+  F     +G  PT +++N ++  +
Sbjct: 453 HQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGL 509


>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  158 bits (399), Expect = 1e-36
 Identities = 72/124 (58%), Positives = 99/124 (79%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           KPDV M+N +IHGLCS+GK+++A+++ +EMK R   PNLVT+NTLM+G YK RD E+AS 
Sbjct: 566 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           IW  IL+ G QPDIISYNI + GLC+C+R S A+   + A+  G+LPT+ITWNI+VRA+L
Sbjct: 626 IWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVL 685

Query: 340 NSGS 329
           ++G+
Sbjct: 686 DNGA 689



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           PDV  Y TLI+ L   G M +A+++  EM  R +TP++  YN L+DG +K  D   AS I
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241

Query: 517 WAQILKN-GLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           W ++LK   + P+I SYN+ INGLC C +F  +  ++             T++ ++  + 
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 340 NSGS 329
            SG+
Sbjct: 302 GSGN 305



 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 40/115 (34%), Positives = 68/115 (59%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           P V+ YNTLI+GL  A +  EA  ++ EM ++   PN++TY+ LM+GL + +  + A  +
Sbjct: 497 PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNL 556

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVV 353
           W Q L+ G +PD+  +NI I+GLC+  +   A+ L+        +P  +T N ++
Sbjct: 557 WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611



 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 38/121 (31%), Positives = 69/121 (57%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           P++  YN +I+GLC  GK  E+ EI   MK      +L TY+TL+ GL  + + + A+ +
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAILN 338
           + ++ +NG+ PD++ YN  +NG     R    + L+ +   EG   T +++NI++R +  
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFE 371

Query: 337 S 335
           +
Sbjct: 372 N 372



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 39/123 (31%), Positives = 71/123 (57%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           KP+  + N +I+G   A K+++A+     M ++   P +VTYNTL++GL K     +A  
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           +  ++L  G +P++I+Y++ +NGLC   +   A+ L+  AL +G  P     NI++  + 
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580

Query: 340 NSG 332
           +SG
Sbjct: 581 SSG 583



 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 34/117 (29%), Positives = 59/117 (50%)
 Frame = -2

Query: 694 DVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIW 515
           D   Y+++I+GLC  G++ E   +L +M      PN    N +++G  +    E A   +
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 514 AQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAI 344
             ++  G  P +++YN  INGL    RFS A  L    L +G  P  IT+++++  +
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 32/117 (27%), Positives = 63/117 (53%)
 Frame = -2

Query: 694 DVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIW 515
           D + Y  L+HGLC  G + +A+ IL E +N     +   Y+++++GL +    ++ +G+ 
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452

Query: 514 AQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAI 344
            Q+ K+G +P+    N  ING    ++   A+  F   + +G  PT +T+N ++  +
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 509



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEM-KNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           PDV  YN LI G    G +  A EI   + K  ++ PN+ +YN +++GL K    +++  
Sbjct: 217 PDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFE 276

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           IW ++ KN    D+ +Y+  I+GLC       A  ++      G+ P  + +N ++   L
Sbjct: 277 IWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 336

Query: 340 NSG 332
            +G
Sbjct: 337 RAG 339



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/123 (28%), Positives = 57/123 (46%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           +P +  YN+L++ L  + K  EA       +   ++PNL TYN L+    + +  +KA  
Sbjct: 111 QPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKE 170

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           +   + + G  PD+ SY   IN L      S A+ LFD     G+ P    +NI++    
Sbjct: 171 LLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFF 230

Query: 340 NSG 332
             G
Sbjct: 231 KKG 233


>emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  155 bits (391), Expect = 1e-35
 Identities = 71/120 (59%), Positives = 95/120 (79%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           KPDV M+N +IHGLCS+GK+++A+++ +EMK RN  PNLVT+NTLM+G YK RD E+AS 
Sbjct: 541 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASK 600

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           IW  IL+ GLQPDIISYNI + GLC+C+R S A+   + A+  G+LPT+ITWNI+V+  L
Sbjct: 601 IWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYL 660



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           PDV  Y TLI+ L   G M +A+++  EM  R +TP++  YN L+DG +K  D   AS I
Sbjct: 157 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 216

Query: 517 WAQILKN-GLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           W ++LK   + P+I SYN+ INGLC C +F  +  ++             T++ ++  + 
Sbjct: 217 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 276

Query: 340 NSGS 329
            SG+
Sbjct: 277 GSGN 280



 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 40/115 (34%), Positives = 67/115 (58%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           P V+ YNTLI+GL  A +  EA  ++ EM  +   PN++TY+ LM+GL + +  + A  +
Sbjct: 472 PTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNL 531

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVV 353
           W Q L+ G +PD+  +NI I+GLC+  +   A+ L+        +P  +T N ++
Sbjct: 532 WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLM 586



 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 38/121 (31%), Positives = 69/121 (57%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           P++  YN +I+GLC  GK  E+ EI   MK      +L TY+TL+ GL  + + + A+ +
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 287

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAILN 338
           + ++ +NG+ PD++ YN  +NG     R    + L+ +   EG   T +++NI++R +  
Sbjct: 288 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFE 346

Query: 337 S 335
           +
Sbjct: 347 N 347



 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 39/123 (31%), Positives = 72/123 (58%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           KP+  + N +I+G   A K+++A+     M ++   P +VTYNTL++GL K     +A  
Sbjct: 436 KPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 495

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           +  ++L+ G +P++I+Y++ +NGLC   +   A+ L+  AL +G  P     NI++  + 
Sbjct: 496 LVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 555

Query: 340 NSG 332
           +SG
Sbjct: 556 SSG 558



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/117 (29%), Positives = 59/117 (50%)
 Frame = -2

Query: 694 DVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIW 515
           D   Y+++I+GLC  G++ E   +L +M      PN    N +++G  +    E A   +
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462

Query: 514 AQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAI 344
             ++  G  P +++YN  INGL    RFS A  L    L +G  P  IT+++++  +
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGL 519



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 32/117 (27%), Positives = 63/117 (53%)
 Frame = -2

Query: 694 DVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIW 515
           D + Y  L+HGLC  G + +A+ IL E +N     +   Y+++++GL +    ++ +G+ 
Sbjct: 368 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 427

Query: 514 AQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAI 344
            Q+ K+G +P+    N  ING    ++   A+  F   + +G  PT +T+N ++  +
Sbjct: 428 DQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 484



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEM-KNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           PDV  YN LI G    G +  A EI   + K  ++ PN+ +YN +++GL K    +++  
Sbjct: 192 PDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFE 251

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           IW ++ KN    D+ +Y+  I+GLC       A  ++      G+ P  + +N ++   L
Sbjct: 252 IWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 311

Query: 340 NSG 332
            +G
Sbjct: 312 RAG 314



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 35/123 (28%), Positives = 56/123 (45%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           +P +  YN+L++ L  + K  EA       +   ++PNL TYN L+    + +  +KA  
Sbjct: 86  QPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKE 145

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           +   +   G  PD+ SY   IN L      S A+ LFD     G+ P    +NI++    
Sbjct: 146 LLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFF 205

Query: 340 NSG 332
             G
Sbjct: 206 KKG 208


>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 701

 Score =  153 bits (387), Expect = 3e-35
 Identities = 72/121 (59%), Positives = 92/121 (76%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           KPD+ MYN L+HGLCS  K+++A+++ + MK     PNLVT NTLM+GLYK RD EKAS 
Sbjct: 568 KPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASE 627

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           IW  ILK+GL PDIISYNI I GLC+C+R S A+   + AL  G+LPT++TWNI+VRA +
Sbjct: 628 IWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAV 687

Query: 340 N 338
           N
Sbjct: 688 N 688



 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 39/125 (31%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           KPDV  Y TLI+G+   G +  A+++  EM  R +  ++  YN L+DG +K  D +K   
Sbjct: 183 KPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKE 242

Query: 520 IWAQILKN-GLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAI 344
           IW +++K+  + P++++YNI INGLC C RF  ++ +++            T++ ++  +
Sbjct: 243 IWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGL 302

Query: 343 LNSGS 329
             +G+
Sbjct: 303 CEAGN 307



 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 41/118 (34%), Positives = 65/118 (55%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           P ++ YNTLI GLC A +  EA   + EM  +   P+++T + LMDGL + +  E A  +
Sbjct: 499 PTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNL 558

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAI 344
           W Q L  G +PDI  YNI ++GLC+  +   A+ L+        +P  +T N ++  +
Sbjct: 559 WQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 33/95 (34%), Positives = 56/95 (58%)
 Frame = -2

Query: 694 DVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIW 515
           D + +N +++G C AGK+KE+ E+   M   N    +V+YN L+ GL++    E+A  IW
Sbjct: 326 DAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIW 384

Query: 514 AQILKNGLQPDIISYNIAINGLCACNRFSHAMWLF 410
             + K G +P+  +Y + I+GLC   R + A+ +F
Sbjct: 385 ELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIF 419



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 32/122 (26%), Positives = 69/122 (56%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           P+V+ YN +I+GLC  G+  E++EI   M       ++ TY++L+ GL +  + + A  +
Sbjct: 255 PNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRV 314

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAILN 338
           + +I+++ L  D +++N  +NG C   +   +  L+ +   E    T +++NI+++ +  
Sbjct: 315 YKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN-CQTVVSYNILIKGLFE 373

Query: 337 SG 332
           +G
Sbjct: 374 NG 375



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 36/119 (30%), Positives = 67/119 (56%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           K D  + N LI+G   A K+++A+    EM+ +  +P +V+YNTL+ GL K     +A  
Sbjct: 463 KLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYS 522

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAI 344
              ++L+   +PD+I+ ++ ++GLC   +   A+ L+  AL +G  P    +NI++  +
Sbjct: 523 FVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGL 581



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 36/116 (31%), Positives = 57/116 (49%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           K D   Y++++ GLC  G+M EA+ I+ +M  R    +    N L++G  +    E A  
Sbjct: 428 KLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAIN 487

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVV 353
            + ++   G  P I+SYN  I GLC   RFS A       L +   P  IT ++++
Sbjct: 488 FFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLM 543



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = -2

Query: 694 DVIMYNTLIHGLCSAGKMKEAVEILAEM-KNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           DV  YN LI G    G   +  EI   + K+ ++ PN+VTYN +++GL K    +++  I
Sbjct: 220 DVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEI 279

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAILN 338
           W ++ KN  + D+ +Y+  I+GLC       A+ ++   +   L+  ++T N ++     
Sbjct: 280 WERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCR 339

Query: 337 SG 332
           +G
Sbjct: 340 AG 341



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/123 (27%), Positives = 57/123 (46%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           KP V  YNTL++      +   A       ++ +++PNL TYN L+    K +  EKA  
Sbjct: 113 KPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAIS 172

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           +   +    L+PD+ SY   ING+        A+ +FD   V G++     +N+++    
Sbjct: 173 LLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFF 232

Query: 340 NSG 332
             G
Sbjct: 233 KHG 235



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 33/119 (27%), Positives = 62/119 (52%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           +P+   Y  LIHGLC  G++ +A++I  E ++     +   Y++++DGL K    ++A  
Sbjct: 393 RPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAIS 452

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAI 344
           I  Q+ K G + D    N  ING    ++   A+  F     +G  PT +++N +++ +
Sbjct: 453 IVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGL 511


>ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330549|gb|EFH60968.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 689

 Score =  150 bits (378), Expect = 3e-34
 Identities = 68/121 (56%), Positives = 91/121 (75%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           +PDV+M+N LIHGLCS GK+ +A+ ++A M++RN T NLVTYNTLM+G +K RD  +A+ 
Sbjct: 566 EPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATV 625

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
           IW  + K GLQPDIISYN  + GLC C+R S+A+  FD A   G+ PT  TWNI+VRA++
Sbjct: 626 IWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVV 685

Query: 340 N 338
           N
Sbjct: 686 N 686



 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 41/93 (44%), Positives = 58/93 (62%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           P V+ YN LI GLC AGK  EA   + EM    + P+L TY+ L+ GL + R  E A  +
Sbjct: 497 PTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALEL 556

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAM 419
           W Q L++GL+PD++ +NI I+GLC+  +   AM
Sbjct: 557 WHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAM 589



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           KPDV  Y+T+I+ L   GK+ +A+E+  EM  R + P++  YN L+DG  K +D + A  
Sbjct: 181 KPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQ 240

Query: 520 IWAQILK-NGLQPDIISYNIAINGLCACNRFSHAMWLFD 407
           +W ++L+ + + P++ ++NI I+GL  C R    + ++D
Sbjct: 241 LWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWD 279



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 36/120 (30%), Positives = 58/120 (48%)
 Frame = -2

Query: 700 KPDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASG 521
           +P +  YNTL++    A +  +   + A  +   + PNL TYN L+    K ++ EKA G
Sbjct: 111 EPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170

Query: 520 IWAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAIL 341
               + K G +PD+ SY+  IN L    +   A+ LFD      + P    +NI++   L
Sbjct: 171 FLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFL 230



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 36/116 (31%), Positives = 62/116 (53%)
 Frame = -2

Query: 679 NTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIWAQILK 500
           N LI GL    ++ +A  ++  M      P +V+YN L+ GL +     +AS    ++L+
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527

Query: 499 NGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAILNSG 332
           NGL+PD+ +Y+I + GLC   +   A+ L+   L  GL P  +  NI++  + + G
Sbjct: 528 NGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVG 583



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 30/122 (24%), Positives = 68/122 (55%)
 Frame = -2

Query: 697 PDVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGI 518
           P+V  +N +I GL   G++ + ++I   MK      +L TY++L+ GL    + +KA  +
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESV 312

Query: 517 WAQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAILN 338
           + ++++     D+++YN  + G C C +   ++ L+ I + +      +++NI+++ +L 
Sbjct: 313 FNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRI-MEQRNSVNIVSYNILIKGLLE 371

Query: 337 SG 332
           +G
Sbjct: 372 NG 373



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 37/114 (32%), Positives = 56/114 (49%)
 Frame = -2

Query: 694 DVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIW 515
           DV  Y ++I  LC   +++EA  ++ EM    +  N    N L+ GL +      AS + 
Sbjct: 428 DVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLM 487

Query: 514 AQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVV 353
             + KNG  P ++SYNI I GLC   +F  A       L  GL P   T++I++
Sbjct: 488 RGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILL 541



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 35/121 (28%), Positives = 65/121 (53%)
 Frame = -2

Query: 694 DVIMYNTLIHGLCSAGKMKEAVEILAEMKNRNITPNLVTYNTLMDGLYKTRDCEKASGIW 515
           D   Y   IHGLC  G + +A+ ++ E++++    ++  Y +++D L K R  E+AS + 
Sbjct: 393 DNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLV 452

Query: 514 AQILKNGLQPDIISYNIAINGLCACNRFSHAMWLFDIALVEGLLPTSITWNIVVRAILNS 335
            ++ K+G++ +    N  I GL   +R S A  L       G LPT +++NI++  +  +
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEA 512

Query: 334 G 332
           G
Sbjct: 513 G 513