BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034251
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF50334.1| hypothetical protein [Crucihimalaya wallichii] g...    97   8e-33
dbj|BAF50245.1| hypothetical protein [Capsella bursa-pastoris] g...    97   4e-32
emb|CAF28642.1| ycf68 [Nymphaea alba] gi|50250389|emb|CAF28655.1...    98   9e-24
ref|YP_358635.1| ORF170 [Phalaenopsis aphrodite subsp. formosana...    97   1e-20
ref|YP_007026598.1| Ycf68 [Festuca ovina] gi|426406704|ref|YP_00...    57   1e-10

>dbj|BAF50334.1| hypothetical protein [Crucihimalaya wallichii]
           gi|134286725|dbj|BAF50348.1| hypothetical protein
           [Crucihimalaya wallichii] gi|134286888|dbj|BAF50509.1|
           hypothetical protein [Lepidium virginicum]
           gi|134286902|dbj|BAF50523.1| hypothetical protein
           [Lepidium virginicum] gi|134286977|dbj|BAF50597.1|
           hypothetical protein [Lobularia maritima]
           gi|134286991|dbj|BAF50611.1| hypothetical protein
           [Lobularia maritima]
          Length = 111

 Score = 97.4 bits (241), Expect(3) = 8e-33
 Identities = 46/49 (93%), Positives = 47/49 (95%)
 Frame = +2

Query: 38  FFHAFPGGLEKAAINRISLILPSRKEEREIIFPFRRDQEIGSSHKKNAW 184
           FFHAFPGGLEKAAINRI LILPSRKEEREI+FPFRRDQEIGSS KKNAW
Sbjct: 32  FFHAFPGGLEKAAINRIFLILPSRKEEREILFPFRRDQEIGSSRKKNAW 80



 Score = 55.5 bits (132), Expect(3) = 8e-33
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = +3

Query: 186 INNSLLGLRPPQSL*TPPISAMGCVYLSIS 275
           INNSLLGLRPPQSL TPPISAMG VYLSIS
Sbjct: 82  INNSLLGLRPPQSLRTPPISAMGRVYLSIS 111



 Score = 33.1 bits (74), Expect(3) = 8e-33
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +1

Query: 7  GDGGIVPFEPFFSCF 51
          GDGGIVPFEPFF  F
Sbjct: 22 GDGGIVPFEPFFHAF 36


>dbj|BAF50245.1| hypothetical protein [Capsella bursa-pastoris]
           gi|134286635|dbj|BAF50259.1| hypothetical protein
           [Capsella bursa-pastoris]
          Length = 111

 Score = 97.4 bits (241), Expect(3) = 4e-32
 Identities = 46/49 (93%), Positives = 47/49 (95%)
 Frame = +2

Query: 38  FFHAFPGGLEKAAINRISLILPSRKEEREIIFPFRRDQEIGSSHKKNAW 184
           FFHAFPGGLEKAAINRI LILPSRKEEREI+FPFRRDQEIGSS KKNAW
Sbjct: 32  FFHAFPGGLEKAAINRIFLILPSRKEEREILFPFRRDQEIGSSRKKNAW 80



 Score = 53.1 bits (126), Expect(3) = 4e-32
 Identities = 27/30 (90%), Positives = 27/30 (90%)
 Frame = +3

Query: 186 INNSLLGLRPPQSL*TPPISAMGCVYLSIS 275
           INNSLLGLRPPQSL TPPISA G VYLSIS
Sbjct: 82  INNSLLGLRPPQSLRTPPISAKGRVYLSIS 111



 Score = 33.1 bits (74), Expect(3) = 4e-32
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +1

Query: 7  GDGGIVPFEPFFSCF 51
          GDGGIVPFEPFF  F
Sbjct: 22 GDGGIVPFEPFFHAF 36


>emb|CAF28642.1| ycf68 [Nymphaea alba] gi|50250389|emb|CAF28655.1| ycf68 [Nymphaea
           alba]
          Length = 101

 Score = 98.2 bits (243), Expect(2) = 9e-24
 Identities = 48/53 (90%), Positives = 49/53 (92%), Gaps = 2/53 (3%)
 Frame = +2

Query: 38  FFHAFPGGLEKAAINRISLILPSRK--EEREIIFPFRRDQEIGSSHKKNAWYK 190
           FFHAFPGGLEKAAINRISLI PSRK  EEREI+FPFR DQEIGSSHKKNAWYK
Sbjct: 49  FFHAFPGGLEKAAINRISLIFPSRKRKEEREILFPFRGDQEIGSSHKKNAWYK 101



 Score = 37.0 bits (84), Expect(2) = 9e-24
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +1

Query: 1  ERGDGGIVPFEPFFSCF 51
          ERGDGGIVPFEPFF  F
Sbjct: 37 ERGDGGIVPFEPFFHAF 53


>ref|YP_358635.1| ORF170 [Phalaenopsis aphrodite subsp. formosana]
           gi|58802851|gb|AAW82571.1| ORF170 [Phalaenopsis
           aphrodite subsp. formosana]
          Length = 170

 Score = 97.1 bits (240), Expect(2) = 1e-20
 Identities = 55/85 (64%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
 Frame = +2

Query: 38  FFHAFPGGLEKAAINRISLILPSRKEEREIIFPFRRDQEIGSSH--KKNAWYK*LASWSS 211
           FFHA  GGL+KAAINRI  ILPSRKEEREI+FPFRRDQEIGSSH  ++            
Sbjct: 82  FFHA--GGLKKAAINRIFRILPSRKEEREILFPFRRDQEIGSSHNIRRMLGINNSLLGFR 139

Query: 212 TPSVTMNAPDQCNGMCLFIYLLTRN 286
            P       DQCNGMCLFIYLLTRN
Sbjct: 140 PPQSLRALLDQCNGMCLFIYLLTRN 164



 Score = 27.7 bits (60), Expect(2) = 1e-20
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +1

Query: 7   GDGGIVPFEPFF 42
           GD GI+PFEPFF
Sbjct: 72  GDRGIIPFEPFF 83


>ref|YP_007026598.1| Ycf68 [Festuca ovina] gi|426406704|ref|YP_007026612.1| Ycf68
           [Festuca ovina] gi|427437039|ref|YP_007026512.1| Ycf68
           [Festuca altissima] gi|427437040|ref|YP_007026526.1|
           Ycf68 [Festuca altissima] gi|410177830|gb|AFV62711.1|
           Ycf68 [Festuca altissima] gi|410177831|gb|AFV62712.1|
           Ycf68 [Festuca altissima] gi|410177917|gb|AFV62797.1|
           Ycf68 [Festuca ovina] gi|410177918|gb|AFV62798.1| Ycf68
           [Festuca ovina]
          Length = 144

 Score = 57.4 bits (137), Expect(2) = 1e-10
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +2

Query: 38  FFHAFPGGLEKAAINRISLILPSRKEEREIIFP 136
           FFHAFPGGLEKAAINR  LILP  +EEREI+FP
Sbjct: 112 FFHAFPGGLEKAAINRTFLILPYFQEEREILFP 144



 Score = 33.1 bits (74), Expect(2) = 1e-10
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +1

Query: 7   GDGGIVPFEPFFSCF 51
           GDGGIVPFEPFF  F
Sbjct: 102 GDGGIVPFEPFFHAF 116