BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034233
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   129   4e-28
ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   100   1e-19
ref|XP_002516536.1| ring finger protein, putative [Ricinus commu...   100   2e-19
ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    99   4e-19
ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, puta...    96   3e-18

>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score =  129 bits (323), Expect = 4e-28
 Identities = 81/179 (45%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
 Frame = +3

Query: 15  DEDGNKIFDKSAHIIKVSDAGFKSRWSDVGSADLLFXXXXXXXXXXXXXXXXXXXXX--- 185
           D D  KI  K  H I VSD   K+RWS V S+DL++                        
Sbjct: 233 DNDDEKILHKINHKIIVSDVVLKNRWSSVSSSDLMYLNSELVHAMSSDRFASLDSNNSAM 292

Query: 186 GPYTINERAMKLKEDMDKKRLFESKVNRIERSHSVTGSSLPSTSESEWNV--TSRFLIPA 359
           G    +   MK+KE++++KR+FES+V+RI  S+ V+ S LPSTS++E N    SRFL P 
Sbjct: 293 GRPIEDWEVMKIKEEIERKRIFESRVSRINHSNPVSSSGLPSTSKTEANSGHASRFLHPT 352

Query: 360 EKRSLSEIVNFSRFVDHYGLKNRLRDSPDV-NITREEKMRKLWSPIARRTVVEWFAGRE 533
           EKRS+SEI   SR+ D +  KNR+R+S    N  +EE+MR+LW PIARRT VEWFA RE
Sbjct: 353 EKRSMSEITACSRYAD-FSTKNRIRESSLAQNNIKEERMRRLWLPIARRT-VEWFANRE 409


>ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 426

 Score =  100 bits (250), Expect = 1e-19
 Identities = 72/184 (39%), Positives = 98/184 (53%), Gaps = 11/184 (5%)
 Frame = +3

Query: 15  DEDGN-KIFDKSAHIIKVSDAGFKSRWSDVGSADLLFXXXXXXXXXXXXXXXXXXXXXGP 191
           D DGN K + K  H I +SD  FK RWS+V S+DL+F                       
Sbjct: 230 DSDGNQKGYHKHNHRITISDVVFKHRWSNVSSSDLMFLNSEMLNDASSNRFSNLESNADM 289

Query: 192 YTI------NERAMKLKEDMDKKRLFESKVNRIERSHSVTGSSLPSTSESEWNVT--SRF 347
            +       NE+ M +KE+M++K  FESKV  +    SV+   L  TS+S    T   ++
Sbjct: 290 MSSTRGVVENEQIMNIKEEMERKISFESKVGVLNNIKSVSDKHLLFTSDSAGKSTHAPKY 349

Query: 348 LIPAEKRSLSEIVNFSRFVDHYGLKNRL-RDSPDV-NITREEKMRKLWSPIARRTVVEWF 521
             P EKRS+SEI   SRF D  G+K R+ +DS  + N  +EE+MR++W PIARRT  +WF
Sbjct: 350 ANPGEKRSMSEITAVSRFGD-LGMKMRVFKDSSSLQNNLKEERMRQIWFPIARRT-AQWF 407

Query: 522 AGRE 533
             RE
Sbjct: 408 VNRE 411


>ref|XP_002516536.1| ring finger protein, putative [Ricinus communis]
           gi|223544356|gb|EEF45877.1| ring finger protein,
           putative [Ricinus communis]
          Length = 407

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 71/179 (39%), Positives = 98/179 (54%), Gaps = 6/179 (3%)
 Frame = +3

Query: 6   IYSDEDGNKIF-DKSAHIIKVSDAGFKSRWSDVGSADLLFXXXXXXXXXXXXXXXXXXXX 182
           + S E  NK F  K  H I VSD   K+RWSD  S+DLL                     
Sbjct: 218 LLSQEGHNKKFLHKFKHKIIVSDVIIKNRWSDFNSSDLLSMSSEMLNVMSSNMFSHSDST 277

Query: 183 XGP----YTINERAMKLKEDMDKKRLFESKVNRIERSHSVTGSSLPSTSESEWNVTSRFL 350
            G      ++NE   K+KED+++KRL ESK+ + E S S + S  PSTS  +   + + +
Sbjct: 278 NGRSYNNLSMNEHIEKIKEDIERKRLCESKLTKAEGSDSFSASCFPSTS-YKGESSLKMI 336

Query: 351 IPAEKRSLSEIVNFSRFVDHYGLKNRLRDSPDVNIT-REEKMRKLWSPIARRTVVEWFA 524
            P EKRS+SEI   SRF +   LKN++R+S     + RE++ R+LW PIA+RT V+WFA
Sbjct: 337 NPGEKRSISEITVCSRF-NGSSLKNKIRESASPRSSEREDRTRRLWFPIAQRT-VQWFA 393


>ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 419

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 73/182 (40%), Positives = 97/182 (53%), Gaps = 9/182 (4%)
 Frame = +3

Query: 15  DEDGN-KIFDKSAHIIKVSDAGFKSRWSDVGSADLLF--XXXXXXXXXXXXXXXXXXXXX 185
           D DGN K + K  H I +SD  FK RWS+V S+DL+F                       
Sbjct: 230 DSDGNQKGYHKHNHRITISDVVFKHRWSNVSSSDLMFLNSEMLNDTSSNRFSSNLESITR 289

Query: 186 GPYTINERAMKLKEDMDKKRLFESKV----NRIERSHSVTGSSLPSTSESEWNVTSRFLI 353
           G    NE+ M +KE+M++K  FE+KV    N I   H       P TS+S      +++ 
Sbjct: 290 GVVVENEQIMNIKEEMERKISFENKVVGALNNIVSDHK---EDPPFTSDS----APKYVN 342

Query: 354 PAEKRSLSEIVNFSRFVDHYGLKNR-LRDSPDV-NITREEKMRKLWSPIARRTVVEWFAG 527
           P EKRS+SEI   SRF D  G+K R L+DS  + N  +EE+MR++W PIARRT  +WF  
Sbjct: 343 PGEKRSMSEITAVSRFGD-LGMKMRVLKDSDSLQNNLKEERMRQIWFPIARRT-AQWFVN 400

Query: 528 RE 533
           RE
Sbjct: 401 RE 402


>ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, putative [Ricinus communis]
           gi|223546708|gb|EEF48206.1| RING-H2 finger protein ATL4J
           precursor, putative [Ricinus communis]
          Length = 267

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 66/180 (36%), Positives = 95/180 (52%), Gaps = 8/180 (4%)
 Frame = +3

Query: 18  EDGNKIFDKSAHIIKVSDAGFKSRWSDVGSADLLFXXXXXXXXXXXXXXXXXXXXXGPY- 194
           +D  ++  K  H I +SD   K+RWS+V S+DL+F                       + 
Sbjct: 75  DDEQRVLHKFNHKIIISDVVLKNRWSNVSSSDLMFLNAEMLQDMSSNRFSSSDSNNEQFI 134

Query: 195 -TINERAMKLKEDMDKKRLFESKVNRIERSHSVTG-SSLPSTSESEWNV----TSRFLIP 356
            T NE+ +K+KE+M+KKRLFESK + I    S T     PSTS     +    TS  +  
Sbjct: 135 STENEQMVKIKEEMEKKRLFESKFSTISNCDSPTPFPGNPSTSSDSNRISGHNTSSIIDS 194

Query: 357 AEKRSLSEIVNFSRFVDHYGLKNRLRDS-PDVNITREEKMRKLWSPIARRTVVEWFAGRE 533
            ++RS+SEI   SRF  +  +K  +R+S    N   E+++R+ W PIARRT V+WFA RE
Sbjct: 195 GDRRSVSEITGLSRF-RNVSIKKTIRESFSGENNREEDRVRRQWLPIARRT-VQWFANRE 252