BLASTX nr result
ID: Coptis21_contig00034231
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034231 (354 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39152.3| unnamed protein product [Vitis vinifera] 80 1e-13 ref|XP_002267730.1| PREDICTED: mitochondrial import inner membra... 80 1e-13 ref|XP_002321119.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 ref|XP_002531603.1| mitochondria associated granulocyte macropha... 78 7e-13 dbj|BAB10087.1| unnamed protein product [Arabidopsis thaliana] 74 1e-11 >emb|CBI39152.3| unnamed protein product [Vitis vinifera] Length = 253 Score = 80.5 bits (197), Expect = 1e-13 Identities = 40/52 (76%), Positives = 45/52 (86%), Gaps = 1/52 (1%) Frame = -3 Query: 352 ILGVTENSSWEEILQKYNTLFERNA-NGSFYLQSKIQKAKEYLEAANQGKGQ 200 ILGVTE S+WEEILQKY+TLFERNA NGSFYLQSK+ +AKE LEA +QG Q Sbjct: 198 ILGVTEQSTWEEILQKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHQGNSQ 249 >ref|XP_002267730.1| PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like [Vitis vinifera] Length = 120 Score = 80.5 bits (197), Expect = 1e-13 Identities = 40/52 (76%), Positives = 45/52 (86%), Gaps = 1/52 (1%) Frame = -3 Query: 352 ILGVTENSSWEEILQKYNTLFERNA-NGSFYLQSKIQKAKEYLEAANQGKGQ 200 ILGVTE S+WEEILQKY+TLFERNA NGSFYLQSK+ +AKE LEA +QG Q Sbjct: 65 ILGVTEQSTWEEILQKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHQGNSQ 116 >ref|XP_002321119.1| predicted protein [Populus trichocarpa] gi|222861892|gb|EEE99434.1| predicted protein [Populus trichocarpa] Length = 116 Score = 80.1 bits (196), Expect = 2e-13 Identities = 38/52 (73%), Positives = 47/52 (90%), Gaps = 1/52 (1%) Frame = -3 Query: 352 ILGVTENSSWEEILQKYNTLFERNA-NGSFYLQSKIQKAKEYLEAANQGKGQ 200 ILGVTE +SWEEIL+KY+TLFERN+ NGSFY+QSK+ +AKE LEA +QGKG+ Sbjct: 61 ILGVTEETSWEEILKKYDTLFERNSKNGSFYIQSKVHRAKECLEAVHQGKGE 112 >ref|XP_002531603.1| mitochondria associated granulocyte macrophage csf signaling molecule, putative [Ricinus communis] gi|223528770|gb|EEF30778.1| mitochondria associated granulocyte macrophage csf signaling molecule, putative [Ricinus communis] Length = 190 Score = 78.2 bits (191), Expect = 7e-13 Identities = 38/52 (73%), Positives = 45/52 (86%), Gaps = 1/52 (1%) Frame = -3 Query: 352 ILGVTENSSWEEILQKYNTLFERNA-NGSFYLQSKIQKAKEYLEAANQGKGQ 200 ILGVT+ ++WEEIL KY TLFERNA NGSFYLQSK+ +AKE LEA +QGKG+ Sbjct: 76 ILGVTKETAWEEILNKYETLFERNAKNGSFYLQSKVHRAKECLEALHQGKGE 127 >dbj|BAB10087.1| unnamed protein product [Arabidopsis thaliana] Length = 102 Score = 73.9 bits (180), Expect = 1e-11 Identities = 41/59 (69%), Positives = 46/59 (77%), Gaps = 1/59 (1%) Frame = -3 Query: 352 ILGVTENSSWEEILQKYNTLFERNA-NGSFYLQSKIQKAKEYLEAANQGKGQ*KSVRTS 179 ILGVTE SSW+EIL+KY+TLFERNA NGSFYLQSK+ +AKE LE A Q KS TS Sbjct: 48 ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ-----KSTTTS 101