BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034227
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CBI26320.3| unnamed protein product [Vitis vinifera]              135   4e-30
ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi...   135   4e-30
ref|XP_003595326.1| Pentatricopeptide repeat-containing protein ...   130   1e-28
ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28

>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/76 (82%), Positives = 69/76 (90%)
 Frame = -1

Query: 336 KEDALTYHSEKLAIAFALIASNSSVPIRIIKNLRVCYDCHASTKLISKIYDREIIVRDRN 157
           KED L+YHSE+LAIAFALIAS+SS+PIRIIKNLRVC DCHA TKLIS  Y R+IIVRDRN
Sbjct: 516 KEDFLSYHSERLAIAFALIASSSSMPIRIIKNLRVCGDCHAITKLISAAYQRDIIVRDRN 575

Query: 156 RFHHFRDGKCSCLDYW 109
           RFHHF+DG CSCLDYW
Sbjct: 576 RFHHFKDGSCSCLDYW 591


>emb|CBI26320.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  135 bits (339), Expect = 4e-30
 Identities = 62/76 (81%), Positives = 69/76 (90%)
 Frame = -1

Query: 336 KEDALTYHSEKLAIAFALIASNSSVPIRIIKNLRVCYDCHASTKLISKIYDREIIVRDRN 157
           KEDAL+YHSE+LAIAFALIAS+   PIRIIKNLRVC DCH S+KLISKIY+REIIVRDRN
Sbjct: 447 KEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRN 506

Query: 156 RFHHFRDGKCSCLDYW 109
           RFHHF++G CSC DYW
Sbjct: 507 RFHHFKEGACSCSDYW 522


>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  135 bits (339), Expect = 4e-30
 Identities = 62/76 (81%), Positives = 69/76 (90%)
 Frame = -1

Query: 336 KEDALTYHSEKLAIAFALIASNSSVPIRIIKNLRVCYDCHASTKLISKIYDREIIVRDRN 157
           KEDAL+YHSE+LAIAFALIAS+   PIRIIKNLRVC DCH S+KLISKIY+REIIVRDRN
Sbjct: 515 KEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRN 574

Query: 156 RFHHFRDGKCSCLDYW 109
           RFHHF++G CSC DYW
Sbjct: 575 RFHHFKEGACSCSDYW 590


>ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484374|gb|AES65577.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 740

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/76 (81%), Positives = 66/76 (86%)
 Frame = -1

Query: 336 KEDALTYHSEKLAIAFALIASNSSVPIRIIKNLRVCYDCHASTKLISKIYDREIIVRDRN 157
           KE  L+YHSE+LAIAFALIAS SS+ IRIIKNLRVC DCHA TKLIS  Y REIIVRDRN
Sbjct: 665 KEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREIIVRDRN 724

Query: 156 RFHHFRDGKCSCLDYW 109
           RFHHF+DG CSCLDYW
Sbjct: 725 RFHHFKDGSCSCLDYW 740


>ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  128 bits (321), Expect = 5e-28
 Identities = 59/76 (77%), Positives = 66/76 (86%)
 Frame = -1

Query: 336 KEDALTYHSEKLAIAFALIASNSSVPIRIIKNLRVCYDCHASTKLISKIYDREIIVRDRN 157
           KE ALTYHSEKLA+AF LI++  S PIRI+KNLRVC DCHA+TKL+SKIY R IIVRDRN
Sbjct: 656 KETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRN 715

Query: 156 RFHHFRDGKCSCLDYW 109
           RFHHFR+G CSC DYW
Sbjct: 716 RFHHFREGYCSCGDYW 731