BLASTX nr result

ID: Coptis21_contig00034218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034218
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...    58   9e-07

>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = -2

Query: 188 KKFSYSRASPSIRWPHLKLTENPTSSNTQV-IIFPSPSLEQDPSVENETSPSS 33
           KKFSYSRASPSIRWPHLKL+++ TS +TQ  I  PSP+   D   E+E+   S
Sbjct: 15  KKFSYSRASPSIRWPHLKLSDSCTSPHTQFHIASPSPTQFFDEMPESESDNKS 67


Top