BLASTX nr result

ID: Coptis21_contig00034203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034203
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520658.1| conserved hypothetical protein [Ricinus comm...    57   1e-06

>ref|XP_002520658.1| conserved hypothetical protein [Ricinus communis]
           gi|223540043|gb|EEF41620.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/115 (29%), Positives = 56/115 (48%)
 Frame = -2

Query: 346 KHVRWNGPWTIQGFIFSVKSAKSLEGGDTERNFDLVDFWVQIYGLPRDKINDANVRSVGS 167
           K V   GPWT   +   +   K  E    E      DFW+Q+Y LP    ++  V+++G+
Sbjct: 95  KRVENGGPWTFNNYHILLHRLKEKENPH-EVELKWTDFWIQVYRLPIGFRSEKVVKNIGN 153

Query: 166 HLGKVKVVDLCCSSEFHKPVARVRVRMDIKERLLKGIELSTEVGEVIPVTFKYEK 2
           ++G+    DL       +   R+RVR+D  + LL  +++    GE   + FKYE+
Sbjct: 154 YVGEYLESDLNNFDGTWREYIRLRVRVDSTKPLLANMKIKKVGGESSAIDFKYER 208


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