BLASTX nr result

ID: Coptis21_contig00034201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034201
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145137.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   187   1e-45
ref|XP_003546388.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   184   5e-45
gb|ACU20841.1| unknown [Glycine max]                                  184   5e-45
ref|XP_002528137.1| conserved hypothetical protein [Ricinus comm...   184   5e-45
ref|XP_003533613.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   184   7e-45

>ref|XP_004145137.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Cucumis
           sativus] gi|449471403|ref|XP_004153299.1| PREDICTED:
           ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Cucumis
           sativus] gi|449474044|ref|XP_004154058.1| PREDICTED:
           ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Cucumis
           sativus] gi|449503343|ref|XP_004161955.1| PREDICTED:
           ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Cucumis
           sativus]
          Length = 482

 Score =  187 bits (474), Expect = 1e-45
 Identities = 85/104 (81%), Positives = 93/104 (89%)
 Frame = +1

Query: 1   DFKEGPNGFGVYASKDIEPLRRARVIMEIPLELMLTISQKLPWMFFPDIVPVGHPIFDII 180
           +FKEGP+GFGVYASKD+EPLRRARVIMEIPLELMLTISQKLPWMFFPDI+P+GHPIFDII
Sbjct: 92  EFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTISQKLPWMFFPDIIPLGHPIFDII 151

Query: 181 NSTDPETDWDXXXXXXXXXSFDREGNFWQLYGDFLPSADECTSL 312
           NST+PETDWD         +FDR+ NFWQLYGDFLPS DECTSL
Sbjct: 152 NSTNPETDWDLRLACLLLYAFDRDDNFWQLYGDFLPSIDECTSL 195


>ref|XP_003546388.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Glycine
           max]
          Length = 483

 Score =  184 bits (468), Expect = 5e-45
 Identities = 85/103 (82%), Positives = 92/103 (89%)
 Frame = +1

Query: 4   FKEGPNGFGVYASKDIEPLRRARVIMEIPLELMLTISQKLPWMFFPDIVPVGHPIFDIIN 183
           FKEGP+GFGVYASKD+EPLRRARVIMEIPLELMLTIS+KLPWMFFPDI+P+ HPIFDIIN
Sbjct: 94  FKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIIN 153

Query: 184 STDPETDWDXXXXXXXXXSFDREGNFWQLYGDFLPSADECTSL 312
           ST+PETDWD         +FD EGNFWQLYGDFLPSADECTSL
Sbjct: 154 STNPETDWDLRLACLLLYAFDCEGNFWQLYGDFLPSADECTSL 196


>gb|ACU20841.1| unknown [Glycine max]
          Length = 411

 Score =  184 bits (468), Expect = 5e-45
 Identities = 85/103 (82%), Positives = 92/103 (89%)
 Frame = +1

Query: 4   FKEGPNGFGVYASKDIEPLRRARVIMEIPLELMLTISQKLPWMFFPDIVPVGHPIFDIIN 183
           FKEGP+GFGVYASKD+EPLRRARVIMEIPLELMLTIS+KLPWMFFPDI+P+ HPIFDIIN
Sbjct: 94  FKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIIN 153

Query: 184 STDPETDWDXXXXXXXXXSFDREGNFWQLYGDFLPSADECTSL 312
           ST+PETDWD         +FD EGNFWQLYGDFLPSADECTSL
Sbjct: 154 STNPETDWDLRLACLLLYAFDCEGNFWQLYGDFLPSADECTSL 196


>ref|XP_002528137.1| conserved hypothetical protein [Ricinus communis]
           gi|223532435|gb|EEF34228.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 483

 Score =  184 bits (468), Expect = 5e-45
 Identities = 85/104 (81%), Positives = 92/104 (88%)
 Frame = +1

Query: 1   DFKEGPNGFGVYASKDIEPLRRARVIMEIPLELMLTISQKLPWMFFPDIVPVGHPIFDII 180
           +FKEGP+GFGVYASKDIEPLRRAR+IMEIP+ELMLTIS+KLPWMFFPDI+PVGHPIFDII
Sbjct: 93  EFKEGPDGFGVYASKDIEPLRRARMIMEIPIELMLTISKKLPWMFFPDIIPVGHPIFDII 152

Query: 181 NSTDPETDWDXXXXXXXXXSFDREGNFWQLYGDFLPSADECTSL 312
           NSTDPETDWD         SFD + NFWQLYGDFLPS DECTSL
Sbjct: 153 NSTDPETDWDLRLACLLLFSFDCKDNFWQLYGDFLPSEDECTSL 196


>ref|XP_003533613.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Glycine
           max]
          Length = 482

 Score =  184 bits (467), Expect = 7e-45
 Identities = 84/103 (81%), Positives = 92/103 (89%)
 Frame = +1

Query: 4   FKEGPNGFGVYASKDIEPLRRARVIMEIPLELMLTISQKLPWMFFPDIVPVGHPIFDIIN 183
           FKEGP+GFGVYASKD+EPLRRARV+MEIPLELMLTIS+KLPWMFFPDI+P+ HPIFDIIN
Sbjct: 93  FKEGPDGFGVYASKDVEPLRRARVVMEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIIN 152

Query: 184 STDPETDWDXXXXXXXXXSFDREGNFWQLYGDFLPSADECTSL 312
           ST+PETDWD         +FD EGNFWQLYGDFLPSADECTSL
Sbjct: 153 STNPETDWDLRLACLLLYAFDCEGNFWQLYGDFLPSADECTSL 195


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