BLASTX nr result

ID: Coptis21_contig00034199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034199
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248...    97   1e-18
ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002531334.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
ref|XP_002879680.1| hypothetical protein ARALYDRAFT_902892 [Arab...    69   5e-10
ref|XP_003625509.1| BRI1-KD interacting protein [Medicago trunca...    68   9e-10

>ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248230 isoform 3 [Vitis
           vinifera] gi|225439745|ref|XP_002274341.1| PREDICTED:
           uncharacterized protein LOC100248230 isoform 1 [Vitis
           vinifera] gi|147801762|emb|CAN77855.1| hypothetical
           protein VITISV_037693 [Vitis vinifera]
           gi|297741478|emb|CBI32610.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 54/111 (48%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
 Frame = +2

Query: 8   KASNLVSLDEKDEVPDISLHMKSHTESENLSAECPISLPTFTKPVSAMKGSGEKVGIPLK 187
           K S   S  E+D  PD +L      +S +       SLPT  K VSAMKGS +K GIPLK
Sbjct: 112 KTSLAGSSGEEDGNPDATLQENYSLKSLSPDISRTASLPTPLKLVSAMKGSRDKEGIPLK 171

Query: 188 KLSVTWAPDVYDPPCNSISHMVKS--HSSQRSRNKKDSKHRHKGKSSQGSN 334
           KL+VTWAPDVYDPP   +SH V++     Q   N+K+ KH+ KGK+++GSN
Sbjct: 172 KLNVTWAPDVYDPPPTIVSHTVRNCKKQQQSKNNRKNGKHKQKGKAARGSN 222


>ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|222855017|gb|EEE92564.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 10/118 (8%)
 Frame = +2

Query: 5   EKASNLVSLDEKDEVPDISLHMKSHTESENL-SAECPISLPTFTKPVSAMKGSGEKVGIP 181
           + +S++   DE+D  P+  L +    E  +L S   PI        VSAMKGS EK G  
Sbjct: 61  DNSSSMAPSDEEDNEPETGLQLLFPEEFPHLNSTRLPI--------VSAMKGSREKQGGS 112

Query: 182 LKKLSVTWAPDVYDPPCNSISHMVKSHSSQRSR---------NKKDSKHRHKGKSSQG 328
            +KL+V+WAPDVYDP  NS+SH VKS   + SR         NKK+ K   KG SS+G
Sbjct: 113 PRKLTVSWAPDVYDPIPNSLSHSVKSKQKKSSRKDRDKDNNHNKKNGKKGQKGSSSKG 170


>ref|XP_002531334.1| conserved hypothetical protein [Ricinus communis]
           gi|223529056|gb|EEF31041.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 234

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
 Frame = +2

Query: 29  LDEKDEVPDISLHMKSHTESENLSAECPISLPTFTKPVSAMKGSGEKVGIPLKKLSVTWA 208
           L E+D+ P+        T  + LS+E PI        VSAMKGS EK+G  L+KL+V+WA
Sbjct: 73  LVEEDDEPE--------TAMQQLSSEGPIQPAVLL--VSAMKGSREKLGASLRKLTVSWA 122

Query: 209 PDVYDPPCNSISHMVKSHSSQ----RSRNKKDSKHRHKGKSSQGSN 334
           PDVYDP  NS+SH VKS   +    R R+K+ + ++  GK  Q  N
Sbjct: 123 PDVYDPIPNSLSHTVKSKQKKSKKDRDRDKESNNYKKNGKRGQKGN 168


>ref|XP_002879680.1| hypothetical protein ARALYDRAFT_902892 [Arabidopsis lyrata subsp.
           lyrata] gi|297325519|gb|EFH55939.1| hypothetical protein
           ARALYDRAFT_902892 [Arabidopsis lyrata subsp. lyrata]
          Length = 192

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/83 (43%), Positives = 48/83 (57%)
 Frame = +2

Query: 83  ESENLSAECPISLPTFTKPVSAMKGSGEKVGIPLKKLSVTWAPDVYDPPCNSISHMVKSH 262
           + ENL+ + PI L      + A+KGS EK G+ L+K SV+WA DVYDPP +  SH V   
Sbjct: 77  KDENLTTQTPIVL------IPAIKGSREKHGLSLRKSSVSWAADVYDPPPSIASHTVTRS 130

Query: 263 SSQRSRNKKDSKHRHKGKSSQGS 331
             Q+ ++K    HR  GK  Q S
Sbjct: 131 KKQQQKSKSKDNHRKTGKKGQKS 153


>ref|XP_003625509.1| BRI1-KD interacting protein [Medicago truncatula]
           gi|355500524|gb|AES81727.1| BRI1-KD interacting protein
           [Medicago truncatula]
          Length = 335

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
 Frame = +2

Query: 41  DEVPDISLHMKSHTESENLSAECPISLPTFTKPVSAMKGSGEKVGIPLKKLSVTWAPDVY 220
           DE  D S+    +  S + +    ISLP  ++  SA+KGS +K G P  KL+V WA DVY
Sbjct: 170 DEDADSSVTESLNEHSAHQAYSRSISLPAPSELKSALKGSRDKNGEPHGKLTVKWAADVY 229

Query: 221 DPPCNSISHMVKSHSSQRSRNKKDSKHR----HKGKSSQGSN 334
           DP    +SH VK+    +SR KK+ K      +KG S++G N
Sbjct: 230 DPVPTLVSHTVKNKKQPKSRKKKNEKKNAKKGNKGNSTRGGN 271


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