BLASTX nr result

ID: Coptis21_contig00034186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034186
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301986.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|AAG12549.1|AC007797_9 Unknown Protein [Arabidopsis thaliana]        63   2e-08
ref|NP_173412.1| filament-like plant protein 4 [Arabidopsis thal...    63   2e-08
emb|CBI17390.3| unnamed protein product [Vitis vinifera]               63   2e-08
dbj|BAD95104.1| hypothetical protein [Arabidopsis thaliana]            63   2e-08

>ref|XP_002301986.1| predicted protein [Populus trichocarpa] gi|222843712|gb|EEE81259.1|
            predicted protein [Populus trichocarpa]
          Length = 1082

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/53 (60%), Positives = 40/53 (75%)
 Frame = -2

Query: 256  ESYNTLERRAQKLVAQVSSLRAKVEALDVELQKEKQNHRDALATCKELEE*LQ 98
            ESY +LE RAQ+L  +V+ LR K E L+ ELQ+EK +H+DAL  CKELEE LQ
Sbjct: 865  ESYRSLETRAQELETEVNLLRVKTETLESELQEEKTSHQDALTRCKELEEQLQ 917


>gb|AAG12549.1|AC007797_9 Unknown Protein [Arabidopsis thaliana]
          Length = 1024

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 42/54 (77%)
 Frame = -2

Query: 256 ESYNTLERRAQKLVAQVSSLRAKVEALDVELQKEKQNHRDALATCKELEE*LQR 95
           ESY +LE R+ +L  +++SL+ K+E L+ EL  EK+NHR+ALA C+ELEE LQR
Sbjct: 792 ESYRSLETRSSELEIELTSLKGKIENLEDELHDEKENHREALAKCQELEEQLQR 845


>ref|NP_173412.1| filament-like plant protein 4 [Arabidopsis thaliana]
           gi|334182703|ref|NP_001185042.1| filament-like plant
           protein 4 [Arabidopsis thaliana]
           gi|122242586|sp|Q0WSY2.1|FPP4_ARATH RecName:
           Full=Filament-like plant protein 4; Short=AtFPP4
           gi|110743863|dbj|BAE99766.1| hypothetical protein
           [Arabidopsis thaliana] gi|332191782|gb|AEE29903.1|
           filament-like plant protein 4 [Arabidopsis thaliana]
           gi|332191783|gb|AEE29904.1| filament-like plant protein
           4 [Arabidopsis thaliana]
          Length = 982

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 42/54 (77%)
 Frame = -2

Query: 256 ESYNTLERRAQKLVAQVSSLRAKVEALDVELQKEKQNHRDALATCKELEE*LQR 95
           ESY +LE R+ +L  +++SL+ K+E L+ EL  EK+NHR+ALA C+ELEE LQR
Sbjct: 792 ESYRSLETRSSELEIELTSLKGKIENLEDELHDEKENHREALAKCQELEEQLQR 845


>emb|CBI17390.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/69 (49%), Positives = 48/69 (69%)
 Frame = -2

Query: 256 ESYNTLERRAQKLVAQVSSLRAKVEALDVELQKEKQNHRDALATCKELEE*LQRLGWASL 77
           ESY +LE  AQ+L A+V SL+ K+E L+ ELQ+EK +H+DALA C++L+E LQR+   S+
Sbjct: 765 ESYKSLELHAQELEAEVISLQEKMENLNYELQEEKDSHQDALARCEDLQEQLQRVKSHSM 824

Query: 76  WLYIGLPRF 50
            L      F
Sbjct: 825 SLLSSAAEF 833


>dbj|BAD95104.1| hypothetical protein [Arabidopsis thaliana]
          Length = 299

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 42/54 (77%)
 Frame = -2

Query: 256 ESYNTLERRAQKLVAQVSSLRAKVEALDVELQKEKQNHRDALATCKELEE*LQR 95
           ESY +LE R+ +L  +++SL+ K+E L+ EL  EK+NHR+ALA C+ELEE LQR
Sbjct: 109 ESYRSLETRSSELEIELTSLKGKIENLEDELHDEKENHREALAKCQELEEQLQR 162


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