BLASTX nr result

ID: Coptis21_contig00034184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034184
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629765.1| SCAR-like protein [Medicago truncatula] gi|3...   241   6e-62
ref|XP_002305068.1| predicted protein [Populus trichocarpa] gi|2...   237   8e-61
ref|XP_002522581.1| hypothetical protein RCOM_1015180 [Ricinus c...   234   7e-60
ref|XP_004161214.1| PREDICTED: protein SCAR3-like [Cucumis sativus]   229   1e-58
ref|XP_004149068.1| PREDICTED: protein SCAR3-like [Cucumis sativus]   229   1e-58

>ref|XP_003629765.1| SCAR-like protein [Medicago truncatula] gi|355523787|gb|AET04241.1|
           SCAR-like protein [Medicago truncatula]
          Length = 1210

 Score =  241 bits (614), Expect = 6e-62
 Identities = 109/161 (67%), Positives = 130/161 (80%)
 Frame = -3

Query: 487 GSEELYREVDKDDTKGVLDGIAVAGLVGVLRQLGDLAEFAAEVFHDLQEQTVATASRSHK 308
           G  ELYR+ ++DD K +LDG+AVAGLVG+LRQLGDLA+FAAEVFH LQEQ   TASRSHK
Sbjct: 15  GGPELYRDANRDDPKALLDGVAVAGLVGILRQLGDLADFAAEVFHGLQEQVTTTASRSHK 74

Query: 307 MTIRVQHIEAALPPLEKAVFSQTNHLHFAYTDGLDWHPNLNRENIHIVQTDLPSFIMDSY 128
           + +RVQ+IEA+LPPLEKAV +QT+H+HFAYT G +WHP +     H +  DLP FIMDSY
Sbjct: 75  LMVRVQNIEASLPPLEKAVLAQTSHIHFAYTAGCEWHPRIKTARNHFIYNDLPPFIMDSY 134

Query: 127 EECRDPPSLHLLDKFDIGDPGACLKRYSDPSFFKRALPSSE 5
           EECRDPP +HLLDKFD G PG+C +RYSDP+FFKR    SE
Sbjct: 135 EECRDPPRMHLLDKFDTGGPGSCFRRYSDPTFFKRVSADSE 175


>ref|XP_002305068.1| predicted protein [Populus trichocarpa] gi|222848032|gb|EEE85579.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  237 bits (604), Expect = 8e-61
 Identities = 110/156 (70%), Positives = 131/156 (83%), Gaps = 1/156 (0%)
 Frame = -3

Query: 487 GSEELYREVDKD-DTKGVLDGIAVAGLVGVLRQLGDLAEFAAEVFHDLQEQTVATASRSH 311
           G  ELYRE + + D+K VLDG+AVAGLVG+LRQLGDLAEFAAEVFH LQE+ ++TASRSH
Sbjct: 15  GQGELYREANSEGDSKAVLDGVAVAGLVGILRQLGDLAEFAAEVFHGLQERVMSTASRSH 74

Query: 310 KMTIRVQHIEAALPPLEKAVFSQTNHLHFAYTDGLDWHPNLNRENIHIVQTDLPSFIMDS 131
           K+ +RVQ+IEAALPPLEK V +QT+H+HFAYT G +WHP +  E  H +  DLP FIMDS
Sbjct: 75  KLMVRVQNIEAALPPLEKVVLAQTSHIHFAYTPGSEWHPCIQNEQNHFIYNDLPRFIMDS 134

Query: 130 YEECRDPPSLHLLDKFDIGDPGACLKRYSDPSFFKR 23
           YEECRDPP LHLLDKFD G PG+CLKRYSDP++F+R
Sbjct: 135 YEECRDPPRLHLLDKFDTGGPGSCLKRYSDPAYFRR 170


>ref|XP_002522581.1| hypothetical protein RCOM_1015180 [Ricinus communis]
           gi|223538272|gb|EEF39881.1| hypothetical protein
           RCOM_1015180 [Ricinus communis]
          Length = 1111

 Score =  234 bits (596), Expect = 7e-60
 Identities = 109/156 (69%), Positives = 126/156 (80%)
 Frame = -3

Query: 487 GSEELYREVDKDDTKGVLDGIAVAGLVGVLRQLGDLAEFAAEVFHDLQEQTVATASRSHK 308
           G  ELYRE +++D K VLDG+AVAGLVG+L QLGDLAEFAAEVFH LQEQ   TASRSHK
Sbjct: 15  GQSELYREANREDPKAVLDGVAVAGLVGILCQLGDLAEFAAEVFHGLQEQVTTTASRSHK 74

Query: 307 MTIRVQHIEAALPPLEKAVFSQTNHLHFAYTDGLDWHPNLNRENIHIVQTDLPSFIMDSY 128
           + +RVQ+IEAALP LEKAV +QT+H+HFAYT G +WH  +     H +  DLP FIMDSY
Sbjct: 75  LMVRVQNIEAALPSLEKAVLAQTSHIHFAYTAGSEWHSRIQNGQNHFIYNDLPRFIMDSY 134

Query: 127 EECRDPPSLHLLDKFDIGDPGACLKRYSDPSFFKRA 20
           EEC DPP LHLLDKFD G PG+CLKRYSDP+FF+RA
Sbjct: 135 EECSDPPRLHLLDKFDTGGPGSCLKRYSDPTFFRRA 170


>ref|XP_004161214.1| PREDICTED: protein SCAR3-like [Cucumis sativus]
          Length = 1254

 Score =  229 bits (585), Expect = 1e-58
 Identities = 105/162 (64%), Positives = 128/162 (79%)
 Frame = -3

Query: 487 GSEELYREVDKDDTKGVLDGIAVAGLVGVLRQLGDLAEFAAEVFHDLQEQTVATASRSHK 308
           G  +LY + + +D K VLD +AVAGLVG+LRQLGDLAEFA EVFH LQE+ + TASRSHK
Sbjct: 15  GKSDLYVDSNNEDPKAVLDAVAVAGLVGILRQLGDLAEFAGEVFHGLQEEVMTTASRSHK 74

Query: 307 MTIRVQHIEAALPPLEKAVFSQTNHLHFAYTDGLDWHPNLNRENIHIVQTDLPSFIMDSY 128
           + +RV+ IEAALP LEKA+ +QT+H+HFAYT G +WHP +  E  H +  DLP FIMD+Y
Sbjct: 75  VMLRVKQIEAALPSLEKAILAQTSHIHFAYTAGSEWHPRIRTEQNHFIYHDLPRFIMDAY 134

Query: 127 EECRDPPSLHLLDKFDIGDPGACLKRYSDPSFFKRALPSSEV 2
           EECRDPP LHLLDKFD G PG+CLKRYSDP+FFKR   S ++
Sbjct: 135 EECRDPPQLHLLDKFDTGGPGSCLKRYSDPTFFKRMSTSGKI 176


>ref|XP_004149068.1| PREDICTED: protein SCAR3-like [Cucumis sativus]
          Length = 1349

 Score =  229 bits (585), Expect = 1e-58
 Identities = 105/162 (64%), Positives = 128/162 (79%)
 Frame = -3

Query: 487 GSEELYREVDKDDTKGVLDGIAVAGLVGVLRQLGDLAEFAAEVFHDLQEQTVATASRSHK 308
           G  +LY + + +D K VLD +AVAGLVG+LRQLGDLAEFA EVFH LQE+ + TASRSHK
Sbjct: 15  GKSDLYVDSNNEDPKAVLDAVAVAGLVGILRQLGDLAEFAGEVFHGLQEEVMTTASRSHK 74

Query: 307 MTIRVQHIEAALPPLEKAVFSQTNHLHFAYTDGLDWHPNLNRENIHIVQTDLPSFIMDSY 128
           + +RV+ IEAALP LEKA+ +QT+H+HFAYT G +WHP +  E  H +  DLP FIMD+Y
Sbjct: 75  VMLRVKQIEAALPSLEKAILAQTSHIHFAYTAGSEWHPRIRTEQNHFIYHDLPRFIMDAY 134

Query: 127 EECRDPPSLHLLDKFDIGDPGACLKRYSDPSFFKRALPSSEV 2
           EECRDPP LHLLDKFD G PG+CLKRYSDP+FFKR   S ++
Sbjct: 135 EECRDPPQLHLLDKFDTGGPGSCLKRYSDPTFFKRMSTSGKI 176


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