BLASTX nr result

ID: Coptis21_contig00034172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034172
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272758.2| PREDICTED: DUF246 domain-containing protein ...   240   1e-61
emb|CBI18521.3| unnamed protein product [Vitis vinifera]              240   1e-61
ref|XP_002325978.1| predicted protein [Populus trichocarpa] gi|2...   236   2e-60
ref|XP_002891187.1| hypothetical protein ARALYDRAFT_473680 [Arab...   233   2e-59
gb|AAK93632.1| putative growth regulator protein [Arabidopsis th...   232   2e-59

>ref|XP_002272758.2| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 582

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/137 (83%), Positives = 129/137 (94%)
 Frame = -3

Query: 413 GLNQQRISICDAVAVARLLNATLVIPMFHLNSVWRDSSKFGEIFDEEFFVYALRNNVRIV 234
           GLNQQR+SICDAVAVA LLNATLVIPMFHLNSVWRDSSKFG+IFDEEFF+Y LRNNV ++
Sbjct: 180 GLNQQRLSICDAVAVAGLLNATLVIPMFHLNSVWRDSSKFGDIFDEEFFIYTLRNNVNVI 239

Query: 233 KELPEDILERFDHNISNIVNLRIKAWSSPTYYLQKVLPKLLQLGAVRIAPFSNRLAHSVR 54
           +ELP D+L+RFD+NISNIVNLR+KAWSSPTYY+QKVLPKLLQ GAVR+APFSNRLAH+V 
Sbjct: 240 RELPGDVLQRFDNNISNIVNLRLKAWSSPTYYIQKVLPKLLQKGAVRVAPFSNRLAHAVP 299

Query: 53  SNIQDLRCLANYEALRF 3
           S+ Q LRCLAN+EALRF
Sbjct: 300 SDSQSLRCLANFEALRF 316


>emb|CBI18521.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/137 (83%), Positives = 129/137 (94%)
 Frame = -3

Query: 413 GLNQQRISICDAVAVARLLNATLVIPMFHLNSVWRDSSKFGEIFDEEFFVYALRNNVRIV 234
           GLNQQR+SICDAVAVA LLNATLVIPMFHLNSVWRDSSKFG+IFDEEFF+Y LRNNV ++
Sbjct: 90  GLNQQRLSICDAVAVAGLLNATLVIPMFHLNSVWRDSSKFGDIFDEEFFIYTLRNNVNVI 149

Query: 233 KELPEDILERFDHNISNIVNLRIKAWSSPTYYLQKVLPKLLQLGAVRIAPFSNRLAHSVR 54
           +ELP D+L+RFD+NISNIVNLR+KAWSSPTYY+QKVLPKLLQ GAVR+APFSNRLAH+V 
Sbjct: 150 RELPGDVLQRFDNNISNIVNLRLKAWSSPTYYIQKVLPKLLQKGAVRVAPFSNRLAHAVP 209

Query: 53  SNIQDLRCLANYEALRF 3
           S+ Q LRCLAN+EALRF
Sbjct: 210 SDSQSLRCLANFEALRF 226


>ref|XP_002325978.1| predicted protein [Populus trichocarpa] gi|222862853|gb|EEF00360.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  236 bits (601), Expect = 2e-60
 Identities = 113/137 (82%), Positives = 129/137 (94%)
 Frame = -3

Query: 413 GLNQQRISICDAVAVARLLNATLVIPMFHLNSVWRDSSKFGEIFDEEFFVYALRNNVRIV 234
           GLNQQR+SICDAVAVA LLNATLVIP FHLNSVWRDSSKFGEIFDE+FF++AL+NNV++V
Sbjct: 186 GLNQQRLSICDAVAVAGLLNATLVIPFFHLNSVWRDSSKFGEIFDEDFFIHALKNNVKVV 245

Query: 233 KELPEDILERFDHNISNIVNLRIKAWSSPTYYLQKVLPKLLQLGAVRIAPFSNRLAHSVR 54
           +ELP D+LE+FD+NIS+IVNLR+KAWSSPTYYLQKVLPKL Q+ AVRIAPFSNRLAH+V 
Sbjct: 246 RELPSDVLEQFDNNISSIVNLRVKAWSSPTYYLQKVLPKLRQMRAVRIAPFSNRLAHAVP 305

Query: 53  SNIQDLRCLANYEALRF 3
            NIQ LRCLAN+EALRF
Sbjct: 306 PNIQGLRCLANFEALRF 322


>ref|XP_002891187.1| hypothetical protein ARALYDRAFT_473680 [Arabidopsis lyrata subsp.
           lyrata] gi|297337029|gb|EFH67446.1| hypothetical protein
           ARALYDRAFT_473680 [Arabidopsis lyrata subsp. lyrata]
          Length = 569

 Score =  233 bits (593), Expect = 2e-59
 Identities = 111/137 (81%), Positives = 130/137 (94%)
 Frame = -3

Query: 413 GLNQQRISICDAVAVARLLNATLVIPMFHLNSVWRDSSKFGEIFDEEFFVYALRNNVRIV 234
           GLNQQR+SICDAVAVA LLNATLVIP+FHLNSVWRDSSKFG+IFDE+FF+YAL  NV +V
Sbjct: 171 GLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSKFGDIFDEDFFIYALSKNVNVV 230

Query: 233 KELPEDILERFDHNISNIVNLRIKAWSSPTYYLQKVLPKLLQLGAVRIAPFSNRLAHSVR 54
           KELP+DILER+++NIS+IVNLR+KAWSSP YYLQKVLP+LL+LGAVR+APFSNRLAH+V 
Sbjct: 231 KELPKDILERYNYNISSIVNLRLKAWSSPAYYLQKVLPQLLRLGAVRVAPFSNRLAHAVP 290

Query: 53  SNIQDLRCLANYEALRF 3
           ++IQ LRCLAN+EALRF
Sbjct: 291 AHIQGLRCLANFEALRF 307


>gb|AAK93632.1| putative growth regulator protein [Arabidopsis thaliana]
          Length = 568

 Score =  232 bits (592), Expect = 2e-59
 Identities = 110/137 (80%), Positives = 130/137 (94%)
 Frame = -3

Query: 413 GLNQQRISICDAVAVARLLNATLVIPMFHLNSVWRDSSKFGEIFDEEFFVYALRNNVRIV 234
           GLNQQR+SICDAVAVA LLNATLVIP+FHLNSVWRDSSKFG+IFDE+FF+YAL  NV +V
Sbjct: 170 GLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSKFGDIFDEDFFIYALSKNVNVV 229

Query: 233 KELPEDILERFDHNISNIVNLRIKAWSSPTYYLQKVLPKLLQLGAVRIAPFSNRLAHSVR 54
           KELP+D+LER+++NIS+IVNLR+KAWSSP YYLQKVLP+LL+LGAVR+APFSNRLAH+V 
Sbjct: 230 KELPKDVLERYNYNISSIVNLRLKAWSSPAYYLQKVLPQLLRLGAVRVAPFSNRLAHAVP 289

Query: 53  SNIQDLRCLANYEALRF 3
           ++IQ LRCLAN+EALRF
Sbjct: 290 AHIQGLRCLANFEALRF 306


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