BLASTX nr result

ID: Coptis21_contig00034170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034170
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYL...   456   e-126
emb|CBI27422.3| unnamed protein product [Vitis vinifera]              456   e-126
ref|XP_002514555.1| menaquinone biosynthesis protein, putative [...   442   e-122
ref|XP_002314907.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120
ref|XP_003545988.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   432   e-119

>ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYLLO, chloroplastic-like
            [Vitis vinifera]
          Length = 1614

 Score =  456 bits (1172), Expect = e-126
 Identities = 216/287 (75%), Positives = 254/287 (88%)
 Frame = -1

Query: 861  SRLGLTYFCIAPGSRSSPLAVAASSHPRTTCISCFDERSLAFHAVGYARGSYKPAVVITS 682
            +R GL YFC+APGSRSSPLA+AAS+HP TTCI+CFDERSLAFHA+GYARGS+KPAVVITS
Sbjct: 266  TRFGLMYFCVAPGSRSSPLAIAASTHPLTTCIACFDERSLAFHALGYARGSHKPAVVITS 325

Query: 681  SGTAVSNLLPAVVEASQDFVPLLLLTADRPPELQNAGANQAINQVNHFGSFVRSFFSLPA 502
            SGTAVSNLLPAVVE+SQ FVPLLLLTADRPPEL +AGANQAINQVNHFGSFVR FF LP 
Sbjct: 326  SGTAVSNLLPAVVESSQGFVPLLLLTADRPPELHDAGANQAINQVNHFGSFVRFFFGLPV 385

Query: 501  PTDHVPARMVLTTVDSAVYFATHAPSGPVHINCPFREPLEDSPRDWMLSCLKGLEIWMSR 322
            PTDH+PARM+LTT+DSAVY+AT +P GPVHINCPFREPLE+SP++WMLSCLKGL+ WMS 
Sbjct: 386  PTDHIPARMILTTLDSAVYWATSSPCGPVHINCPFREPLENSPKEWMLSCLKGLDSWMSS 445

Query: 321  EDPFTKYVRTQCSHASNSIQLQVEDLLNTIQCANKGLLLIGAIHTEDEAWAALLLAKHLS 142
             +PFTKY++ Q SHA +  Q Q+ +++  IQ A +GLLLIGAI TED+ WAALLLAKHL 
Sbjct: 446  AEPFTKYIQLQHSHAPDDSQGQMAEVIEVIQGAKRGLLLIGAITTEDDIWAALLLAKHLC 505

Query: 141  WPIVADILSGLRLKKVFTAFPQFTEKMLFIDHLDHALLADSVKVWAQ 1
            WP+VADILSGLRL+K+ T+F +  + +LF+DHLDHALL+D V+VWAQ
Sbjct: 506  WPVVADILSGLRLRKLSTSFQEIEDNVLFLDHLDHALLSDFVRVWAQ 552


>emb|CBI27422.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  456 bits (1172), Expect = e-126
 Identities = 216/287 (75%), Positives = 254/287 (88%)
 Frame = -1

Query: 861 SRLGLTYFCIAPGSRSSPLAVAASSHPRTTCISCFDERSLAFHAVGYARGSYKPAVVITS 682
           +R GL YFC+APGSRSSPLA+AAS+HP TTCI+CFDERSLAFHA+GYARGS+KPAVVITS
Sbjct: 80  TRFGLMYFCVAPGSRSSPLAIAASTHPLTTCIACFDERSLAFHALGYARGSHKPAVVITS 139

Query: 681 SGTAVSNLLPAVVEASQDFVPLLLLTADRPPELQNAGANQAINQVNHFGSFVRSFFSLPA 502
           SGTAVSNLLPAVVE+SQ FVPLLLLTADRPPEL +AGANQAINQVNHFGSFVR FF LP 
Sbjct: 140 SGTAVSNLLPAVVESSQGFVPLLLLTADRPPELHDAGANQAINQVNHFGSFVRFFFGLPV 199

Query: 501 PTDHVPARMVLTTVDSAVYFATHAPSGPVHINCPFREPLEDSPRDWMLSCLKGLEIWMSR 322
           PTDH+PARM+LTT+DSAVY+AT +P GPVHINCPFREPLE+SP++WMLSCLKGL+ WMS 
Sbjct: 200 PTDHIPARMILTTLDSAVYWATSSPCGPVHINCPFREPLENSPKEWMLSCLKGLDSWMSS 259

Query: 321 EDPFTKYVRTQCSHASNSIQLQVEDLLNTIQCANKGLLLIGAIHTEDEAWAALLLAKHLS 142
            +PFTKY++ Q SHA +  Q Q+ +++  IQ A +GLLLIGAI TED+ WAALLLAKHL 
Sbjct: 260 AEPFTKYIQLQHSHAPDDSQGQMAEVIEVIQGAKRGLLLIGAITTEDDIWAALLLAKHLC 319

Query: 141 WPIVADILSGLRLKKVFTAFPQFTEKMLFIDHLDHALLADSVKVWAQ 1
           WP+VADILSGLRL+K+ T+F +  + +LF+DHLDHALL+D V+VWAQ
Sbjct: 320 WPVVADILSGLRLRKLSTSFQEIEDNVLFLDHLDHALLSDFVRVWAQ 366


>ref|XP_002514555.1| menaquinone biosynthesis protein, putative [Ricinus communis]
            gi|223546159|gb|EEF47661.1| menaquinone biosynthesis
            protein, putative [Ricinus communis]
          Length = 1679

 Score =  442 bits (1138), Expect = e-122
 Identities = 215/288 (74%), Positives = 247/288 (85%), Gaps = 1/288 (0%)
 Frame = -1

Query: 861  SRLGLTYFCIAPGSRSSPLAVAASSHPRTTCISCFDERSLAFHAVGYARGSYKPAVVITS 682
            SRLGLTYFCIAPGSRSSPLA+AAS HP TTC++CFDERSLAFHAVGYARGS KPAVVITS
Sbjct: 337  SRLGLTYFCIAPGSRSSPLAIAASVHPLTTCVACFDERSLAFHAVGYARGSQKPAVVITS 396

Query: 681  SGTAVSNLLPAVVEASQDFVPLLLLTADRPPELQNAGANQAINQVNHFGSFVRSFFSLPA 502
            SGTAVSNLLPAVVEASQDFVPLLLLTADRPPELQNAGANQ+INQVNHFGSFVR FFSLPA
Sbjct: 397  SGTAVSNLLPAVVEASQDFVPLLLLTADRPPELQNAGANQSINQVNHFGSFVRCFFSLPA 456

Query: 501  PTDHVPARMVLTTVDSAVYFATHAPSGPVHINCPFREPLEDSPRDWMLSCLKGLEIWMSR 322
            PTD +PARMVLTT+DSAV++AT +P GPVHINCPFREPL+DSP  WM SCLKGL+IWMS 
Sbjct: 457  PTDSIPARMVLTTLDSAVHWATSSPYGPVHINCPFREPLDDSPDKWMFSCLKGLDIWMSS 516

Query: 321  EDPFTKYVRTQCS-HASNSIQLQVEDLLNTIQCANKGLLLIGAIHTEDEAWAALLLAKHL 145
             +PFTKY+    S       ++ +  +L  +Q A +GLLLI A+HTED+ WAAL+LAKHL
Sbjct: 517  AEPFTKYIEMPSSLPCDGDNRIALIQILEIVQRAKRGLLLIAAMHTEDDIWAALILAKHL 576

Query: 144  SWPIVADILSGLRLKKVFTAFPQFTEKMLFIDHLDHALLADSVKVWAQ 1
            +WP+VADILSGLRL+K+ + FP   E +LF+DHLDHALL++ V+ W Q
Sbjct: 577  NWPVVADILSGLRLRKLLSYFPGVEENILFVDHLDHALLSNFVRGWMQ 624


>ref|XP_002314907.1| predicted protein [Populus trichocarpa] gi|222863947|gb|EEF01078.1|
            predicted protein [Populus trichocarpa]
          Length = 848

 Score =  436 bits (1122), Expect = e-120
 Identities = 210/286 (73%), Positives = 251/286 (87%), Gaps = 1/286 (0%)
 Frame = -1

Query: 861  SRLGLTYFCIAPGSRSSPLAVAASSHPRTTCISCFDERSLAFHAVGYARGSYKPAVVITS 682
            SRLG+ YFC+APGSRSSPLA+AAS+HP TTCISCFDERSLAFHAVGY++GS+KPAV+ITS
Sbjct: 304  SRLGIMYFCVAPGSRSSPLAIAASTHPLTTCISCFDERSLAFHAVGYSKGSHKPAVIITS 363

Query: 681  SGTAVSNLLPAVVEASQDFVPLLLLTADRPPELQNAGANQAINQVNHFGSFVRSFFSLPA 502
            SGTAVSNLLPAVVEASQDFVPLLLLTADRPPEL +AGANQAINQVNHFGSFVR  FSLPA
Sbjct: 364  SGTAVSNLLPAVVEASQDFVPLLLLTADRPPELLDAGANQAINQVNHFGSFVRFTFSLPA 423

Query: 501  PTDHVPARMVLTTVDSAVYFATHAPSGPVHINCPFREPLEDSPRDWMLSCLKGLEIWMSR 322
            PTD++PARMVLTT+DSAV++AT  P GPVHINCPFREPL+DS  +WMLSCLKGL+IWMS 
Sbjct: 424  PTDNIPARMVLTTIDSAVHWATSLPYGPVHINCPFREPLDDSSDNWMLSCLKGLDIWMSG 483

Query: 321  EDPFTKYVRTQCSHA-SNSIQLQVEDLLNTIQCANKGLLLIGAIHTEDEAWAALLLAKHL 145
             +PFTKY++ Q S A  +   + + ++L  I+  ++GLLL+GAIHTEDE WAAL+LAKHL
Sbjct: 484  AEPFTKYIQLQNSLACKDGACVPMAEVLEIIKGTDRGLLLLGAIHTEDEIWAALILAKHL 543

Query: 144  SWPIVADILSGLRLKKVFTAFPQFTEKMLFIDHLDHALLADSVKVW 7
            +WP+VADILSGLRL+K+  + P+  E +LF+DHLDHALL++ V+ W
Sbjct: 544  NWPVVADILSGLRLRKLLPSLPEIEENVLFVDHLDHALLSEWVRGW 589


>ref|XP_003545988.1| PREDICTED: protein PHYLLO, chloroplastic-like [Glycine max]
          Length = 1614

 Score =  432 bits (1110), Expect = e-119
 Identities = 208/287 (72%), Positives = 241/287 (83%)
 Frame = -1

Query: 861  SRLGLTYFCIAPGSRSSPLAVAASSHPRTTCISCFDERSLAFHAVGYARGSYKPAVVITS 682
            +RLGL YFCIAPGSRSSPLAVAA+SH   TCISC+DERSLAFHAVGY RGS+ PAVVITS
Sbjct: 330  TRLGLMYFCIAPGSRSSPLAVAAASHKLITCISCYDERSLAFHAVGYGRGSHIPAVVITS 389

Query: 681  SGTAVSNLLPAVVEASQDFVPLLLLTADRPPELQNAGANQAINQVNHFGSFVRSFFSLPA 502
            SGTAVSNLLPAVVEASQDFVPL+LLTADRPPEL + GANQAINQVNHFGSFVR FF+LPA
Sbjct: 390  SGTAVSNLLPAVVEASQDFVPLILLTADRPPELLDCGANQAINQVNHFGSFVRFFFNLPA 449

Query: 501  PTDHVPARMVLTTVDSAVYFATHAPSGPVHINCPFREPLEDSPRDWMLSCLKGLEIWMSR 322
            PTD +PA+MVLTT+DSAV++AT +P GPVHINCPFREPLE SP  W+ SCL GL++WM+ 
Sbjct: 450  PTDQIPAKMVLTTLDSAVHWATSSPCGPVHINCPFREPLESSPCRWLSSCLSGLDLWMAN 509

Query: 321  EDPFTKYVRTQCSHASNSIQLQVEDLLNTIQCANKGLLLIGAIHTEDEAWAALLLAKHLS 142
             +PFTKY+  Q SH   +   ++ ++LN I  AN  LLL GAIHTEDE WAALLLAKHL 
Sbjct: 510  AEPFTKYIHMQLSHTCINAPGEMTEVLNLILRANNSLLLFGAIHTEDEMWAALLLAKHLQ 569

Query: 141  WPIVADILSGLRLKKVFTAFPQFTEKMLFIDHLDHALLADSVKVWAQ 1
            WP+VADILSGLRL+K+ T+FP      +F+D+LDHALL+DSVK W +
Sbjct: 570  WPVVADILSGLRLRKLLTSFPDIERNFIFVDNLDHALLSDSVKGWLE 616


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