BLASTX nr result

ID: Coptis21_contig00034169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034169
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloproteas...   145   3e-33
ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252...   142   3e-32
emb|CBI34993.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002281222.1| PREDICTED: uncharacterized protein LOC100257...   137   7e-31
ref|XP_002517441.1| ATP binding protein, putative [Ricinus commu...   135   4e-30

>ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
           vinifera]
          Length = 528

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/103 (64%), Positives = 82/103 (79%)
 Frame = +2

Query: 5   KNSKNLSLSMDDNEEVIDEYKGAQFWWASHKTMSDKQTLSFYPTDADDNRYYMLTFHKKH 184
           K+S+++ LSMDD+EEV DE+KG + WWAS+K     QT+SFYP  AD  RYY LTFHK++
Sbjct: 95  KDSQSVVLSMDDHEEVTDEFKGVKLWWASNKNPPPMQTISFYPA-ADGKRYYKLTFHKQY 153

Query: 185 RGLVTDSYMNHVLEEGKAIGVKNRLRKLYTNNPSDNWYGYNKS 313
           R L+  SY+NHV++EGKAI V+NR RKLYTNNPS NWYGY KS
Sbjct: 154 RDLIVGSYLNHVIKEGKAIAVRNRQRKLYTNNPSQNWYGYKKS 196


>ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252565 [Vitis vinifera]
          Length = 520

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/103 (62%), Positives = 79/103 (76%)
 Frame = +2

Query: 5   KNSKNLSLSMDDNEEVIDEYKGAQFWWASHKTMSDKQTLSFYPTDADDNRYYMLTFHKKH 184
           K+S++L LSMDD EEV DE+KG + WWASHK     QT SFYP  AD+ R+Y LTFHK H
Sbjct: 94  KDSQSLVLSMDDREEVTDEFKGVKLWWASHKNPPKTQTFSFYPA-ADEKRFYKLTFHKNH 152

Query: 185 RGLVTDSYMNHVLEEGKAIGVKNRLRKLYTNNPSDNWYGYNKS 313
           R +   SY+NHV++EGKAI V+NR RKLYTNNPSD W+GY ++
Sbjct: 153 REMFVGSYLNHVMKEGKAIEVRNRQRKLYTNNPSDKWHGYRRT 195


>emb|CBI34993.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/98 (66%), Positives = 77/98 (78%)
 Frame = +2

Query: 20  LSLSMDDNEEVIDEYKGAQFWWASHKTMSDKQTLSFYPTDADDNRYYMLTFHKKHRGLVT 199
           L LSMDD+EEV DE+KG + WWAS+K     QT+SFYP  AD  RYY LTFHK++R L+ 
Sbjct: 78  LILSMDDHEEVTDEFKGVKLWWASNKNPPPMQTISFYPA-ADGKRYYKLTFHKQYRDLIV 136

Query: 200 DSYMNHVLEEGKAIGVKNRLRKLYTNNPSDNWYGYNKS 313
            SY+NHV++EGKAI V+NR RKLYTNNPS NWYGY KS
Sbjct: 137 GSYLNHVIKEGKAIAVRNRQRKLYTNNPSQNWYGYKKS 174


>ref|XP_002281222.1| PREDICTED: uncharacterized protein LOC100257701 [Vitis vinifera]
          Length = 526

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/103 (59%), Positives = 82/103 (79%)
 Frame = +2

Query: 5   KNSKNLSLSMDDNEEVIDEYKGAQFWWASHKTMSDKQTLSFYPTDADDNRYYMLTFHKKH 184
           K+S+++ LSMDD+EEV DE++G + WW S+K+    Q +SFYP  AD+ RYY LTFH+++
Sbjct: 93  KDSQSVVLSMDDHEEVTDEFQGVKLWWVSNKSPPKMQAISFYPA-ADEKRYYRLTFHQQY 151

Query: 185 RGLVTDSYMNHVLEEGKAIGVKNRLRKLYTNNPSDNWYGYNKS 313
           R L+  SY+NHV++EGKAI V+NR RKL TNNPSDNW+GY KS
Sbjct: 152 RDLIVGSYLNHVIKEGKAIAVRNRQRKLCTNNPSDNWHGYKKS 194


>ref|XP_002517441.1| ATP binding protein, putative [Ricinus communis]
           gi|223543452|gb|EEF44983.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 523

 Score =  135 bits (339), Expect = 4e-30
 Identities = 58/103 (56%), Positives = 80/103 (77%)
 Frame = +2

Query: 5   KNSKNLSLSMDDNEEVIDEYKGAQFWWASHKTMSDKQTLSFYPTDADDNRYYMLTFHKKH 184
           K+ ++L LSMDD+EE+ DEY G + WWAS KT    QT+S+YP +A++ RY+ LT H++H
Sbjct: 93  KDGQSLILSMDDHEEITDEYNGIKVWWASSKTTPKSQTISWYP-EAEERRYFKLTVHRRH 151

Query: 185 RGLVTDSYMNHVLEEGKAIGVKNRLRKLYTNNPSDNWYGYNKS 313
           R ++T SY++HVL+EGK I ++NR RKLYTNNPS NWYG+  S
Sbjct: 152 RDIITTSYIDHVLKEGKTISIRNRQRKLYTNNPSQNWYGWKAS 194


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