BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034129
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE53511.1| hypothetical protein OsJ_36687 [Oryza sativa Japo...    62   4e-08
gb|ABA99740.2| retrotransposon protein, putative, unclassified [...    62   4e-08
gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indi...    60   2e-07
ref|XP_003609231.1| Cytosine-specific methyltransferase [Medicag...    60   2e-07
ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6...    59   4e-07

>gb|EEE53511.1| hypothetical protein OsJ_36687 [Oryza sativa Japonica Group]
          Length = 1441

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/78 (37%), Positives = 39/78 (50%)
 Frame = -1

Query: 237 KLVWRVPISLKVKIFFWEAVSSCILTADILRHRGTMVSPVCTMCDTFDEDIGHLFLHCSF 58
           +L+W+     +V+ F W AV    LTAD L  RG    P C +C +  ED  HL + C F
Sbjct: 498 ELIWKTKAPARVRFFLWLAVKGRCLTADNLSKRGWPHDPTCLLCQSAPEDCNHLLVKCPF 557

Query: 57  VLEVWTKLTQPKVIAFPL 4
              VW +L     + FPL
Sbjct: 558 TNRVWQQLKAWVNVTFPL 575


>gb|ABA99740.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1618

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/78 (37%), Positives = 39/78 (50%)
 Frame = -1

Query: 237 KLVWRVPISLKVKIFFWEAVSSCILTADILRHRGTMVSPVCTMCDTFDEDIGHLFLHCSF 58
           +L+W+     +V+ F W AV    LTAD L  RG    P C +C +  ED  HL + C F
Sbjct: 553 ELIWKTKAPARVRFFLWLAVKGRCLTADNLSKRGWPHDPTCLLCQSAPEDCNHLLVKCPF 612

Query: 57  VLEVWTKLTQPKVIAFPL 4
              VW +L     + FPL
Sbjct: 613 TNRVWQQLKAWVNVTFPL 630


>gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indica Group]
           gi|218196859|gb|EEC79286.1| hypothetical protein
           OsI_20088 [Oryza sativa Indica Group]
          Length = 216

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/71 (36%), Positives = 37/71 (52%)
 Frame = -1

Query: 231 VWRVPISLKVKIFFWEAVSSCILTADILRHRGTMVSPVCTMCDTFDEDIGHLFLHCSFVL 52
           +W + +  K+K+F W    + +     +R RG     +C MC+ FDED GHLFL C  V 
Sbjct: 111 IWNMEVPNKIKMFVWRLAHNSLPVRCNIRRRGMESDNLCPMCNRFDEDCGHLFLKCKGVK 170

Query: 51  EVWTKLTQPKV 19
           E W  L   +V
Sbjct: 171 ECWRSLNLEEV 181


>ref|XP_003609231.1| Cytosine-specific methyltransferase [Medicago truncatula]
           gi|355510286|gb|AES91428.1| Cytosine-specific
           methyltransferase [Medicago truncatula]
          Length = 569

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -1

Query: 237 KLVWRVPISLKVKIFFWEAVSSCILTADILRHRGTMVSPVCTMCDTFD-EDIGHLFLHCS 61
           KL+W + +  K+K FFW  + +C+ T   L+ RG      C  C+  D ED  HLF+HC 
Sbjct: 316 KLIWSLHVPPKIKHFFWRLLHNCLPTRSNLQGRGVPCQSACVTCNNNDLEDEMHLFMHCK 375

Query: 60  FVLEVW 43
           F ++ W
Sbjct: 376 FAIDCW 381


>ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula]
           gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase
           III subunit RPC6 [Medicago truncatula]
          Length = 456

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/65 (36%), Positives = 37/65 (56%)
 Frame = -1

Query: 237 KLVWRVPISLKVKIFFWEAVSSCILTADILRHRGTMVSPVCTMCDTFDEDIGHLFLHCSF 58
           KL+W++P+  +V+ F W+   + I T   LR RG ++  VC +C   DE   H F+ C  
Sbjct: 261 KLIWKLPLPTRVRNFMWKLARNIIPTRCNLRRRGVVLDTVCPLCFDADESSNHRFMACPM 320

Query: 57  VLEVW 43
            L+VW
Sbjct: 321 TLQVW 325