BLASTX nr result

ID: Coptis21_contig00034119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034119
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX33323.1| secondary cell wall-related glycosyltransferase f...    90   2e-16
ref|XP_003624720.1| Xylosyltransferase [Medicago truncatula] gi|...    76   3e-12
ref|XP_002319193.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_003554053.1| PREDICTED: xylosyltransferase 1-like [Glycin...    70   2e-10
gb|ACU23596.1| unknown [Glycine max]                                   70   2e-10

>gb|AAX33323.1| secondary cell wall-related glycosyltransferase family 14 [Populus
           tremula x Populus tremuloides]
          Length = 397

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/78 (57%), Positives = 55/78 (70%)
 Frame = +3

Query: 75  MGIKEIMIPSIFTLSIFFILYIPALLTRPISRLQAVDTLKILKPIEPYPVTFAYLISASK 254
           MGIK  MI  + T  +F +LYIP  LT PI++   V  L +LK ++PYPVTFAYLISAS+
Sbjct: 1   MGIKLFMISFMVTSILFSLLYIPTKLTTPIAKYNPVINLNMLKDLKPYPVTFAYLISASR 60

Query: 255 GDLNQLKRTLYALYHPGN 308
           GD  +L R L ALYHPGN
Sbjct: 61  GDAKRLMRVLKALYHPGN 78


>ref|XP_003624720.1| Xylosyltransferase [Medicago truncatula]
           gi|355499735|gb|AES80938.1| Xylosyltransferase [Medicago
           truncatula]
          Length = 399

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
 Frame = +3

Query: 75  MGIKEIMIPSIFTLSIFFILYIPALLTRPISRLQ--AVDTLKILKPIEPYPVTFAYLISA 248
           MGIK  M   + T  +FF L+IP  LT  IS L+  A+D   +L+    YP+TFAYLISA
Sbjct: 1   MGIKIFMFTFMVTSILFFFLFIPTRLTLQISTLKPSAMDYFNVLRTNITYPITFAYLISA 60

Query: 249 SKGDLNQLKRTLYALYHPGN 308
           SKGD  +LKR L  LYHP N
Sbjct: 61  SKGDTLKLKRLLKVLYHPNN 80


>ref|XP_002319193.1| predicted protein [Populus trichocarpa] gi|222857569|gb|EEE95116.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/78 (50%), Positives = 46/78 (58%)
 Frame = +3

Query: 75  MGIKEIMIPSIFTLSIFFILYIPALLTRPISRLQAVDTLKILKPIEPYPVTFAYLISASK 254
           MGIK  MI  + T  +F +LYIP  LT P ++              PYPVTF YLISAS+
Sbjct: 1   MGIKLFMISFMVTSILFSLLYIPTKLTTPNAKYNP-----------PYPVTFTYLISASR 49

Query: 255 GDLNQLKRTLYALYHPGN 308
           GD  +L R L ALYHPGN
Sbjct: 50  GDAKRLTRVLKALYHPGN 67


>ref|XP_003554053.1| PREDICTED: xylosyltransferase 1-like [Glycine max]
          Length = 399

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
 Frame = +3

Query: 75  MGIKEIMIPSIFTLSIFFILYIPALLTRPISRLQAVDTLKILKP--IEPYPVTFAYLISA 248
           MG+K  M   + T  +FF+L+IP  LT   S L+       + P   + YPVTFAYLISA
Sbjct: 1   MGLKIFMASFMMTSILFFLLFIPTRLTVQFSTLRPPVNYFSVPPKSSKAYPVTFAYLISA 60

Query: 249 SKGDLNQLKRTLYALYHPGN 308
           SKGD+ +LKR +  LYHPGN
Sbjct: 61  SKGDVVKLKRLMKVLYHPGN 80


>gb|ACU23596.1| unknown [Glycine max]
          Length = 167

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = +3

Query: 75  MGIKEIMIPSIFTLSIFFILYIPALLTRPISRLQAVDTLKILKP--IEPYPVTFAYLISA 248
           MG+K  M   + T  +FF+L+IP  LT   S L+       + P     YPV+FAYLISA
Sbjct: 1   MGLKIFMASFLVTSILFFLLFIPTRLTMQFSTLRPPGNYFSVPPNSSRAYPVSFAYLISA 60

Query: 249 SKGDLNQLKRTLYALYHPGN 308
           SKGD+ +LKR +  LYHPGN
Sbjct: 61  SKGDVVKLKRLMRVLYHPGN 80


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